diff --git a/hamming.rb b/hamming.rb new file mode 100644 index 0000000..58ed912 --- /dev/null +++ b/hamming.rb @@ -0,0 +1,34 @@ +class Hamming + def self.compute(first_strand, second_strand) + + first_strand = first_strand.chars + second_strand = second_strand.chars + + # error handling + if first_strand.length != second_strand.length + raise ArgumentError, "Strands must be the same length." + end + + difference = 0 + recursion(first_strand,second_strand, difference) + end + + def self.recursion(first_strand, second_strand, difference) + # base case + if first_strand.empty? || second_strand.empty? + return difference + end + + if first_strand[0] == second_strand[0] + difference += 0 + first_strand.shift + second_strand.shift + recursion(first_strand, second_strand, difference) + else first_strand[0] != second_strand[0] + difference += 1 + first_strand.shift + second_strand.shift + recursion(first_strand, second_strand, difference) + end + end +end diff --git a/hamming_test.rb b/hamming_test.rb index 2d1f9d7..0ddf0a1 100644 --- a/hamming_test.rb +++ b/hamming_test.rb @@ -4,72 +4,58 @@ class HammingTest < Minitest::Test def test_identical_strands - skip assert_equal 0, Hamming.compute('A', 'A') end def test_long_identical_strands - skip assert_equal 0, Hamming.compute('GGACTGA', 'GGACTGA') end def test_complete_distance_in_single_nucleotide_strands - skip assert_equal 1, Hamming.compute('A', 'G') end def test_complete_distance_in_small_strands - skip assert_equal 2, Hamming.compute('AG', 'CT') end def test_small_distance_in_small_strands - skip assert_equal 1, Hamming.compute('AT', 'CT') end def test_small_distance - skip assert_equal 1, Hamming.compute('GGACG', 'GGTCG') end def test_small_distance_in_long_strands - skip assert_equal 2, Hamming.compute('ACCAGGG', 'ACTATGG') end def test_non_unique_character_in_first_strand - skip assert_equal 1, Hamming.compute('AGA', 'AGG') end def test_non_unique_character_in_second_strand - skip assert_equal 1, Hamming.compute('AGG', 'AGA') end def test_large_distance - skip assert_equal 4, Hamming.compute('GATACA', 'GCATAA') end def test_large_distance_in_off_by_one_strand - skip assert_equal 9, Hamming.compute('GGACGGATTCTG', 'AGGACGGATTCT') end def test_empty_strands - skip assert_equal 0, Hamming.compute('', '') end def test_disallow_first_strand_longer - skip assert_raises(ArgumentError) { Hamming.compute('AATG', 'AAA') } end def test_disallow_second_strand_longer - skip assert_raises(ArgumentError) { Hamming.compute('ATA', 'AGTG') } end end