Tiny ephys data structure #102
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jazlynntan
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Hi, I'm just getting started with deepinterpolation, and hoping to try it out on my neuropixel data. I tried running the training on the tiny ephys sample data provided, which looks like it has 50000 time samples and 384 channels (from loading it into MATLAB). I then ran the example inference script on it and obtained a .h5 output.
I tried using the h5 to dat converter in the publication's figure repository, but the I get the error: ValueError: cannot reshape array of size 38352384 into shape (49938,384). The h5 file appears to have a shape of (49938, 384, 2). I'm guessing the first 2 dimensions are time samples and channels, but what is the third dimension? How can I convert it into a .dat file that Kilosort can use as an input?
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