Skip to content

[NEW_FEATURE] Allow faster graph loading when edge geometry is not needed #152

@edoumazane

Description

@edoumazane

Complete mouse brain vascular graphs can be slow to load (≈ 2 minutes)

  • Most of the size of ClearMap GT files is due to the "edge_geometry" properties.
  • In ClearMap.Analysis.Graphs.GraphGt.Graph objects, "edge_geometry" properties are stored as "graph_properties"
  • graph_tool.load_graph allows to optionally ignore a list of properties

A useful feature would be to optionally specify properties to ignore in ClearMap, when they are not needed.

Metadata

Metadata

Assignees

Labels

enhancementNew feature or request

Type

No type

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions