diff --git a/user-guide/datadepotrepo/resources.md b/user-guide/datadepotrepo/resources.md index aab24f25..33a1375d 100644 --- a/user-guide/datadepotrepo/resources.md +++ b/user-guide/datadepotrepo/resources.md @@ -56,7 +56,7 @@ Below are examples of good organization and description for different dataset ty * Simulation * Hybrid Simulation * Field Research - * [Expert Survey on Community Resilience Testbed Use and Development (Social Science)](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-3333) + * [Expert Survey on Community Resilience Testbed Use and Development (Social Science)](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-3333){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/NHERI-Published/PRJ-3333)) * Interdisciplinary  * Other * Pretell, R., S. Brandenberg, J. Stewart (2023). Consistently computed ground motion intensity measures for liquefaction triggering assessment. DesignSafe-CI. [https://doi.org/10.17603/ds2-6vj1-t096](https://doi.org/10.17603/ds2-6vj1-t096) diff --git a/user-guide/managingdata/experimentalfacilitychecklist.md b/user-guide/managingdata/experimentalfacilitychecklist.md index bcf18110..77f8ba61 100644 --- a/user-guide/managingdata/experimentalfacilitychecklist.md +++ b/user-guide/managingdata/experimentalfacilitychecklist.md @@ -11,9 +11,9 @@ DesignSafe has been developed as a comprehensive research environment supporting * [Best Practices](/user-guide/curating/bestpractices/) & [Policies](/user-guide/curating/policies/) * [Data Curation and Publication Tutorial Videos](https://www.youtube.com/playlist?list=PL2GxvrdFrBlkwHBgQ47pZO-77ZLrJKYHV){ target="_blank" } available in the learning center. * Well-Curated Experimental Projects: - * [Experimental Investigation of Wave, Surge, and Tsunami Transformation Over Natural Shorelines: Reduced Scale Physical Model](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-3218){ target="_blank" } - * [CFS-NHERI: Seismic Resiliency of Repetitively Framed Mid-Rise cold-Formed Steel Buildings](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-2141){ target="_blank" } - * [Progressive Damage and Failure of Wood-Frame Coastal Residential Structures Due to Hurricane Surge and Wave Forces](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-3197){ target="_blank" } + * [Experimental Investigation of Wave, Surge, and Tsunami Transformation Over Natural Shorelines: Reduced Scale Physical Model](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-3218){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/NHERI-Published/PRJ-3218)) + * [CFS-NHERI: Seismic Resiliency of Repetitively Framed Mid-Rise cold-Formed Steel Buildings](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-2141){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/NHERI-Published/PRJ-2141)) + * [Progressive Damage and Failure of Wood-Frame Coastal Residential Structures Due to Hurricane Surge and Wave Forces](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-3197){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/NHERI-Published/PRJ-3197)) * [Frequently Asked Questions](/user-guide/curating/faq/) * [Data Transfer Guide](/user-guide/managingdata/datatransfer/) 3. Familiarize yourself with the available Tools and Apps. diff --git a/user-guide/tools/hazard/jupyter-dedm.md b/user-guide/tools/hazard/jupyter-dedm.md index 80088859..d5ce1f8e 100644 --- a/user-guide/tools/hazard/jupyter-dedm.md +++ b/user-guide/tools/hazard/jupyter-dedm.md @@ -16,7 +16,7 @@ The example makes use of the following DesignSafe resources: Successful utilization of digital technologies in different domains requires different platforms that provide the necessary workflows and software to address the computational requirements. In the area of wind engineering, the effects of wind on structures are typically carried out in research and design by wind tunnel studies, or reliance is made on building standards. The area of computational wind engineering is emerging fast to complement these resources and DesignSafe offers such a platform to address the wind load effects on structures computationally, e.g., using database-enabled design (DED) and computational fluid mechanics (CFD). Jupyter Notebooks are emerging as a web-based interactive computational platform ideally suited for carrying out multiple simulations cases and utilizing DED results for other applications. A database-enabled design of high-rise buildings is developed for the Jupyter Notebook platform akin to the currently available version in the DesignSafe in Tools & Applications > Hazard Apps > VORTEX-Winds: DEDM-HR. This will offer researchers dealing with tall buildings in several NEHRI projects to have quick access to wind load effects and performance of tall buildings in the Jupyter environment. -All files discussed in this use case are shared at [Data Depot > Community Data](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/Use%20Case%20Products/DEDM-HR/). It is recommended that users make a copy of the contents to their directory (My Data) for tests and simulations. +All files discussed in this use case are shared at [Data Depot > Community Data](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/Use%20Case%20Products/DEDM-HR/){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/Use%20Case%20Products/DEDM-HR/)). It is recommended that users make a copy of the contents to their directory (My Data) for tests and simulations. ### Implementation @@ -43,7 +43,7 @@ DesignSafe recently introduced a [Jupyterhub Spawner](/user-guide/tools/jupyterh ##### Step-by-step approach -Fig. 4 shows an example of the step-by-step input interface, [Jupyter DEDM-HR Step-by-step v1.0.ipynb](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/Use%20Case%20Products/DEDM-HR/), which exhibits the inputs of the cross-sectional shape of the building and building dimensions such as building width, depth, and height. For each input form, an instruction/explanation (a cell with blue/green background color) is given for the user to type an appropriate value. By typing an input form and Enter, then the next input form will be shown if the input was made correctly. To minimize the input errors by the user, this Notebook incorporated the Python package “Click”. It is used to limit the user’s input in certain value (e.g., cross-sectional shape input in Fig. 3), allow case-insensitive inputs, and check number or string inputs. To load the package “Click”, the following script is utilized in the Notebook. +Fig. 4 shows an example of the step-by-step input interface, [Jupyter DEDM-HR Step-by-step v1.0.ipynb](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/Use%20Case%20Products/DEDM-HR/){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/Use%20Case%20Products/DEDM-HR/)), which exhibits the inputs of the cross-sectional shape of the building and building dimensions such as building width, depth, and height. For each input form, an instruction/explanation (a cell with blue/green background color) is given for the user to type an appropriate value. By typing an input form and Enter, then the next input form will be shown if the input was made correctly. To minimize the input errors by the user, this Notebook incorporated the Python package “Click”. It is used to limit the user’s input in certain value (e.g., cross-sectional shape input in Fig. 3), allow case-insensitive inputs, and check number or string inputs. To load the package “Click”, the following script is utilized in the Notebook. ```python import sys @@ -57,7 +57,7 @@ import click ##### One-step approach -The aforementioned Step-by-step Jupyter Notebook is intended for helping easily input forms for a user who is not familiar with the DEDM-HR. To streamline the overall input process, a One-step Jupyter Notebook template, [Jupyer DEDM-HR One-step v1.0.ipynb](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/Use%20Case%20Products/DEDM-HR/), is provided, which is only comprised of a single cell involving requests to the server that are discussed in the previous section. Using this template, a user only needs to change input values at the input block and run the cell, which is shown in the following. Please be cautious that cross-sectional shape and terrain/exposure condition inputs are string type and others are number type. +The aforementioned Step-by-step Jupyter Notebook is intended for helping easily input forms for a user who is not familiar with the DEDM-HR. To streamline the overall input process, a One-step Jupyter Notebook template, [Jupyer DEDM-HR One-step v1.0.ipynb](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/Use%20Case%20Products/DEDM-HR/){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/Use%20Case%20Products/DEDM-HR/)), is provided, which is only comprised of a single cell involving requests to the server that are discussed in the previous section. Using this template, a user only needs to change input values at the input block and run the cell, which is shown in the following. Please be cautious that cross-sectional shape and terrain/exposure condition inputs are string type and others are number type. ```python # Please change this input block only diff --git a/user-guide/tools/jupyterhub/examplenotebooks.md b/user-guide/tools/jupyterhub/examplenotebooks.md index d427a2c7..80501c0a 100644 --- a/user-guide/tools/jupyterhub/examplenotebooks.md +++ b/user-guide/tools/jupyterhub/examplenotebooks.md @@ -1,214 +1,122 @@ ## Example Notebooks -### Examples of Jupyter Notebooks Available via DesignSafe - -
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    PRJ-1695 | Probabilistic Seismic Hazard Analysis for the Sliding Displacement of Rigid Sliding Masses

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    PRJ-2889 | Earthquake Time Series from Events in Texas, Oklahoma, and Kansas

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    PRJ-2074 | NHERI Debris Impact Experiments Jupyter Notebook

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    PRJ-2259 | Next Generation Liquefaction (NGL) Partner Dataset Cone Penetration Test (CPT) Viewer

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    PRJ-2363 | Soil-Foundation-Structure Interaction Effects on the Cyclic Failure Potential of Silts and Clays

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    PRJ-1942 | NGA-East Geotechnical Working Group Seismic Site Response Simulation Database

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+### 1. PRJ-1695 | [Probabilistic Seismic Hazard Analysis for the Sliding Displacement of Rigid Sliding Masses](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-1695){ target="_blank" } + +[![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/NHERI-Published/PRJ-1695) + +- **Key function:** Cloud-based analysis that uses external data provided by an API. +- This workflow is about probabilistic seismic slope analysis +- Computes slope displacement hazard curve with given information about slope and earthquake ground motion hazard +- Uses API to directly import ground motion hazard information from USGS hazard website +- Outputs the numeric results of the displacement hazard as csv file + +### 2. PRJ-2889 | [Earthquake Time Series from Events in Texas, Oklahoma, and Kansas](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-2889){ target="_blank" } + +[![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/NHERI-Published/PRJ-2889) + +- **Key function:** Exporting selected ground motion time series from dataset +- This workbook is about providing a user with the ground motion data (maximum limit of 1,000 at once) available from the published data on Designsafe. +- Receives search criteria (ranges of magnitude and distance) from a user and produces a compressed file containing all the time series of selected motion in user's directory, Data Depot on Designsafe. + +### 3. PRJ-2074 | [NHERI Debris Impact Experiments Jupyter Notebook](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-2074){ target="_blank" } + +[![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/NHERI-Published/PRJ-2074) + +- **Key function:** GUI-based visualization and analysis of experiments +- This notebook is about laboratory experiments on debris impact. +- Presents images and videos of the experimental facility, setup, and experimental program through graphical user interface (GUI). +- Performs filtering raw signals gathered from the experiments with selected frequency and range +- Can easily view any result for a user's interest using GUI. + +### 4. PRJ-2259 | [Next Generation Liquefaction (NGL) Partner Dataset Cone Penetration Test (CPT) Viewer](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-2259){ target="_blank" } + +[![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/NHERI-Published/PRJ-2259) + +- **Key function:** GUI-based Visualization on experimental data +- This notebook is to visualize geotechnical field experiments (CPT). +- Bring CPT test results located in SQL database at DesignSafe and plot the results as a function of depth and their probabilistic distributions. +- Can easily view the results that a user wants through graphical user interface (GUI). + +### 5. PRJ-2363 | [Soil-Foundation-Structure Interaction Effects on the Cyclic Failure Potential of Silts and Clays](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-2363/){ target="_blank" } + +[![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/NHERI-Published/PRJ-2363/) + +- **Key function:** Post-processing of experimental data +- This notebook is post-processing experimental data with visualization. +- Import experimental data and process the raw data with sensors' characteristics and filter. +- A user can interactively view the processed experimental data + +### 6. PRJ-1942 | [NGA-East Geotechnical Working Group Seismic Site Response Simulation Database](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-1942){ target="_blank" } + +[![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/NHERI-Published/PRJ-1942) + +- **Key function:** Querying NoSQL database of numerical simulations +- This notebook is to provide results of numerical simulations by interfacing with NoSQL database. ### Jupyter Notebooks for Civil Engineering Courses -
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  1. Oregon State Univ_Structural Analysis
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Directory Name: Demo

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The notebooks available in this directory perform numerical integration for ordinary differential equation in engineering and science

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Directory Name: PythonSetup

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SetupPythonNotebook.ipynb: Guideline on how to setup and use Jupyter notebooks on local machine across several types of operating system (Windows, Linux, and Mac) as well as in DesignSafe workspace.

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The below notebooks describe how to visualize numerical results using python.

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There are two examples for improved speed of for-loops by interfacing with C and Fortran. There is a description on how to install each package.

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  1. UCLA_Soil Mechanics
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Python enables one to write texts and equations in latex format for teaching purpose and provides a graphical user interface with which one can readily see the results by changing the input parameters.

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  1. Univ of Texas_FiniteElementAnalyses in GeotechnicalEngineering
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Directory Name: Notebooks

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Solves the mathematical equations (differential equations) through numerical analysis such as finite element or finite difference methods.

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  1. University of Washington (Workflow, Graduate Level Course)
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Directory Name: freeFieldEffectiveJupyter

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Directory Name: freeFieldJupyterPM4Sand

- - +### 1. [Oregon State Univ_Structural Analysis](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/Jupyter%20Notebooks%20for%20Civil%20Engineering%20Courses/Oregon%20State%20Univ%20_%20Structural%20Analysis){ target="_blank" } + +[![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/Jupyter%20Notebooks%20for%20Civil%20Engineering%20Courses/Oregon%20State%20Univ%20_%20Structural%20Analysis) + +#### Directory `Demo` + +The notebooks available in this directory perform numerical integration for ordinary differential equation in engineering and science: + +- `CentralDifference.ipynb` +- `Newmark_gm.ipynb`: for linear elastic +- `Newmark_nonlinear.ipynb`: for nonlinear elastic +- `reccurrenceFormulation_Equations.ipynb` +- `reccurrenceFormulation_Matrix.ipynb` + +#### Directory `PythonSetup` + +`SetupPythonNotebook.ipynb`: Guideline on how to setup and use Jupyter notebooks on local machine across several types of operating system (Windows, Linux, and Mac) as well as in DesignSafe workspace. + +The below notebooks describe how to visualize numerical results using python. + +- `Subplots_and_legends.ipynb` +- `Plot_example.ipynb` +- `Basic_plotting.ipynb` + +There are two examples for improved speed of for-loops by interfacing with C and Fortran. There is a description on how to install each package. + +- `Cython_fast_loops.ipynb` + - Cython: a superset of the Python language that additionally supports calling C functions and declaring C types on variables and class attributes. +- `Fortran_fast_loops.ipynb` + - Fortran-magic: similar to cython that allows for using Fortran language in python script for fast loop control. + +### 2. [UCLA_Soil Mechanics](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/Jupyter%20Notebooks%20for%20Civil%20Engineering%20Courses/UCLA%20_%20Soil%20Mechanics){ target="_blank" } + +[![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/Jupyter%20Notebooks%20for%20Civil%20Engineering%20Courses/UCLA%20_%20Soil%20Mechanics) + +Python enables one to write texts and equations in latex format for teaching purpose and provides a graphical user interface with which one can readily see the results by changing the input parameters. + +- `StressRotation.ipynb`: Provides a graphical user interface of Mohr Circle plot in engineering mechanics that one can see the result by changing input parameters. +- `TerzaghiPlotting.ipynb`: Shows a mathematical expression in latex format and plots the solution of the partial differential equation. +- `TerzaghisTheory.ipynb`: Describes Terzaghi’s theory of consolidation in soil mechanics along with markdown cell that allows for typing words and latex format. (In general term, jupyter notebook allows us to write texts for engineering and science problems like writing on white board) + +### 3. [Univ of Texas_FiniteElementAnalyses in GeotechnicalEngineering](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/Jupyter%20Notebooks%20for%20Civil%20Engineering%20Courses/Univ%20of%20Texas%20_%20FiniteElementAnalyses%20in%20GeotechnicalEngineering){ target="_blank" } + +[![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/Jupyter%20Notebooks%20for%20Civil%20Engineering%20Courses/Univ%20of%20Texas%20_%20FiniteElementAnalyses%20in%20GeotechnicalEngineering) + +#### Directory `Notebooks` + +Solves the mathematical equations (differential equations) through numerical analysis such as finite element or finite difference methods. + +- `Stiffness_method.ipynb`: linear algebra solution to get displacement (Ku=F) +- `Shape_function.ipynb`: Creating Lagrange polynomials +- `Elastic_bar_linear_fem.ipynb`: One dimensional truss analysis of linear elastic finite element method +- `fdm_seepage_dam.ipynb`: finite difference method for numerical integration + +### 4. [University of Washington](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/Jupyter%20Notebooks%20for%20Civil%20Engineering%20Courses/University_of_Washington){ target="_blank" } + +[![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/Jupyter%20Notebooks%20for%20Civil%20Engineering%20Courses/University_of_Washington) (Workflow, Graduate Level Course) + +#### Directory `freeFieldEffectiveJupyter` + +This notebook runs OpenSees, one of the applications available from workspace on Designsafe, for a model of one-dimensional site response using the PDMY constitutive model. + +#### Directory `freeFieldJupyterPM4Sand` +This notebook runs OpenSees, one of the applications available from workspace on Designsafe, for a model of one-dimensional site response using the PM4Sand constitutive model. diff --git a/user-guide/tools/simulation/adcirc/adcirc.md b/user-guide/tools/simulation/adcirc/adcirc.md index 7c409d7a..560c0803 100644 --- a/user-guide/tools/simulation/adcirc/adcirc.md +++ b/user-guide/tools/simulation/adcirc/adcirc.md @@ -466,9 +466,9 @@ Note you want to most likely copy these files to your MyData or HPC work before - Use Case Products - ``CommunityData/Use Case Products/ADCIRC/adcirc`` - App Examples - ``CommunityData/app_examples/`` - Notable ADCIRC Published Projects: - - [CERA / ADCIRC Storm Surge Hindcasts: Historical Storms 2003-2022](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-3932) - - [Texas FEMA Hurricane Winds and Surge](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-2968) - - [ADCIRC Reduced Order Modeling](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-3870) + - [CERA / ADCIRC Storm Surge Hindcasts: Historical Storms 2003-2022](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-3932){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/NHERI-Published/PRJ-3932)) + - [Texas FEMA Hurricane Winds and Surge](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-2968){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/NHERI-Published/PRJ-2968)) + - [ADCIRC Reduced Order Modeling](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.published/PRJ-3870){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/NHERI-Published/PRJ-3870)) To see a full list of ADCIRC related data in the data depot, search for `ADCIRC` in the keyword search bar. diff --git a/user-guide/tools/simulation/adcirc/examples/shinnecock.md b/user-guide/tools/simulation/adcirc/examples/shinnecock.md index 458f10d2..56eddebd 100644 --- a/user-guide/tools/simulation/adcirc/examples/shinnecock.md +++ b/user-guide/tools/simulation/adcirc/examples/shinnecock.md @@ -12,7 +12,7 @@ The simulation utilizes a finite element grid to model the hydrodynamics in this - The grid's discretization varies from approximately 2 km offshore to around 75 m in nearshore areas. - Due to the coarse resolution, this model does not accurately resolve circulation near the inlet and the back bay. -The input files for this simulation can be found in the CommunityData directory at [``CommunityData/Use Case Products/ADCIRC/adcirc/adcirc_shinnecock_inlet``](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/Use%20Case%20Products/ADCIRC/adcirc/adcirc_shinnecock_inlet). +The input files for this simulation can be found in the CommunityData directory at [`CommunityData/Use Case Products/ADCIRC/adcirc/adcirc_shinnecock_inlet`](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/Use%20Case%20Products/ADCIRC/adcirc/adcirc_shinnecock_inlet){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/Use%20Case%20Products/ADCIRC/adcirc/adcirc_shinnecock_inlet)). ###### ADCIRC Input diff --git a/user-guide/tools/simulation/clawpack.md b/user-guide/tools/simulation/clawpack.md index 8c679941..35731a05 100644 --- a/user-guide/tools/simulation/clawpack.md +++ b/user-guide/tools/simulation/clawpack.md @@ -17,6 +17,4 @@ The Clawpack 5.4.0 suite has been installed into the DesignSafe Jupyter Hub envi ### Example Clawpack Use Case -An example GeoClaw notebook in Jupyter can be seen by navigating to 'community / Jupyter Notebooks / Workspace Application Sample Notebooks / GeoClaw' and opening 'GeoClaw_topotools_example.ipynb', and can be previewed and copied to your own space from here.
- - +An example GeoClaw notebook in Jupyter can be seen at [community / Jupyter Notebooks / Workspace Application Sample Notebooks / GeoClaw](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/Jupyter%20Notebooks/Workspace%20Application%20Sample%20Notebooks/GeoClaw){ target="_blank" } and opening `GeoClaw_topotools_example.ipynb`, then you can preview and copy to your own space **or** [![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/Jupyter%20Notebooks/Workspace%20Application%20Sample%20Notebooks/GeoClaw). diff --git a/user-guide/tools/simulation/opensees.md b/user-guide/tools/simulation/opensees.md index b18453a2..44f6e0d9 100644 --- a/user-guide/tools/simulation/opensees.md +++ b/user-guide/tools/simulation/opensees.md @@ -77,14 +77,14 @@ For detailed explanation of slides below, watch the tutorial above. #### Examples in Community Data { #resources-communitydata } * OpenSees-EXPRESS: - * [input directory](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community//app_examples/opensees/OpenSeesEXPRESS){target="_blank"} + * [input directory](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/app_examples/opensees/OpenSeesEXPRESS){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/app_examples/opensees/OpenSeesEXPRESS)) * input TCL file: freeFieldEffective.tcl * OpenSeesSP: - * [input directory](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community//app_examples/opensees/OpenSeesSP){target="_blank"} + * [input directory](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/app_examples/opensees/OpenSeesSP){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/app_examples/opensees/OpenSeesSP)) * input TCL file: RigidFrame3D.tcl * resources: 1 Node, 2 Processors * OpenSeesMP: - * [input directory](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community//app_examples/opensees/OpenSeesMP){target="_blank"} + * [input directory](https://www.designsafe-ci.org/data/browser/public/designsafe.storage.community/app_examples/opensees/OpenSeesMP){ target="_blank" } ([![Open in DesignSafe](/user-guide/img/Open-in-DesignSafe.svg)](https://jupyter.designsafe-ci.org/hub/user-redirect/lab/tree/CommunityData/app_examples/opensees/OpenSeesMP)) * input TCL file: parallel_motion.tcl * resources: 1 Node, 3 Processors diff --git a/user-guide/tools/simulation/opensees/OSDesignSafe.md b/user-guide/tools/simulation/opensees/OSDesignSafe.md index ae04372a..d00930f5 100644 --- a/user-guide/tools/simulation/opensees/OSDesignSafe.md +++ b/user-guide/tools/simulation/opensees/OSDesignSafe.md @@ -297,20 +297,20 @@ Slides of content presented in the tutorial above