diff --git a/.bumpversion.cfg b/.bumpversion.cfg index 8e08713..2746fb0 100644 --- a/.bumpversion.cfg +++ b/.bumpversion.cfg @@ -1,5 +1,5 @@ [bumpversion] -current_version = 0.3.1 +current_version = 0.4.0 commit = True tag = False diff --git a/.github/workflows/deploy-to-aws.yaml b/.github/workflows/deploy-to-aws.yaml index 50e7b4f..629270f 100644 --- a/.github/workflows/deploy-to-aws.yaml +++ b/.github/workflows/deploy-to-aws.yaml @@ -18,6 +18,9 @@ jobs: needs: call-test-workflow uses: GNS-Science/nshm-github-actions/.github/workflows/deploy-to-aws.yml@main with: - python-version: '3.10' - smoketest-query: "query {about, current_model_version}" + python-version: '3.12' + node-version: '22' + node-pkg-manager: 'yarn2' + smoketest-query: 'query QueryRoot{about}' secrets: inherit + diff --git a/.github/workflows/dev.yml b/.github/workflows/dev.yml index 2ab2a6a..99bd84e 100644 --- a/.github/workflows/dev.yml +++ b/.github/workflows/dev.yml @@ -16,6 +16,7 @@ jobs: uses: GNS-Science/nshm-github-actions/.github/workflows/python-run-tests.yml@main with: operating-systems: "['ubuntu-latest']" - python-versions: "['3.10']" + python-versions: "['3.12']" delete-poetry-lock: ${{ github.event_name == 'schedule' }} # the scheduled build tests against newer dependencies + optional-dependency-groups: dev secrets: inherit diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml index 7da57b6..3e2eb29 100644 --- a/.github/workflows/release.yml +++ b/.github/workflows/release.yml @@ -1,89 +1,28 @@ # Publish package on main branch if it's tagged with 'v*' -name: release & publish workflow +name: Release & publish workflow # Controls when the action will run. on: # Triggers the workflow on push events but only for the master branch push: - tags: - - 'v*' + tags: 'v*' # Allows you to run this workflow manually from the Actions tab workflow_dispatch: -# A workflow run is made up of one or more jobs that can run sequentially or in parallel jobs: - # This workflow contains a single job called "release" - release: - name: Create Release - runs-on: ubuntu-20.04 - strategy: - matrix: - python-versions: [3.8] - - # Steps represent a sequence of tasks that will be executed as part of the job - steps: - - name: Get version from tag - id: tag_name - run: | - echo ::set-output name=current_version::${GITHUB_REF#refs/tags/v} - shell: bash - - # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it - - uses: actions/checkout@v2 - - - name: Get Changelog Entry - id: changelog_reader - uses: mindsers/changelog-reader-action@v2 - with: - validation_depth: 10 - version: ${{ steps.tag_name.outputs.current_version }} - path: ./CHANGELOG.md - - - uses: actions/setup-python@v2 - with: - python-version: ${{ matrix.python-versions }} - - - name: Install dependencies - run: | - python -m pip install --upgrade pip - pip install poetry - - - name: build documentation - run: | - poetry install -E doc - poetry run mkdocs build - - - name: publish documentation - uses: peaceiris/actions-gh-pages@v3 - with: - github_token: ${{ secrets.GITHUB_TOKEN }} - publish_dir: ./site - - # - name: Build wheels and source tarball - # run: >- - # poetry build - - # - name: show temporary files - # run: >- - # ls -l - - # - name: create github release - # id: create_release - # uses: softprops/action-gh-release@v1 - # env: - # GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} - # with: - # body: ${{ steps.changelog_reader.outputs.changes }} - # files: dist/*.whl - # draft: false - # prerelease: false - - # - name: publish to PyPI - # uses: pypa/gh-action-pypi-publish@release/v1 - # with: - # user: __token__ - # password: ${{ secrets.PYPI_API_TOKEN }} - # skip_existing: true + release-and-distribute: + uses: GNS-Science/nshm-github-actions/.github/workflows/python-release.yml@main + with: + python-version: '3.12' + pypi-publish: false + secrets: inherit + +# deploy-docs: +# uses: GNS-Science/nshm-github-actions/.github/workflows/python-deploy-docs.yml@main +# with: +# python-version: '3.12' +# optional-dependency-groups: 'doc' +# secrets: inherit diff --git a/.gitignore b/.gitignore index 0d476d3..5f6e346 100644 --- a/.gitignore +++ b/.gitignore @@ -29,6 +29,8 @@ wheels/ *.egg-info/ .installed.cfg *.egg +requirements.txt +audit.txt # PyInstaller # Usually these files are written by a python script from a template diff --git a/CHANGELOG.md b/CHANGELOG.md index 720558f..1e31427 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -1,12 +1,24 @@ # Changelog + +## [0.4.0] - 2025-10-20 + +### Changed + - migrate to serverless 4 + - use python 3.12 + - migrate pyproject.toml to PEP508 + - ensureCI/CD workflows use minimum install footprints + - update to `nzshm-model 0.14.0` + +### Added + - tox audit step + ## [0.3.1] - 2025-09-15 ### Changed - graphql-server pinned - dev dependencies updated - ## [0.3.0] - 2025-07-29 ### Changed diff --git a/DEVELOPMENT.md b/DEVELOPMENT.md new file mode 100644 index 0000000..d622973 --- /dev/null +++ b/DEVELOPMENT.md @@ -0,0 +1,76 @@ +# DEVELOPMENT + +### Environment setup + + - clone the repo + - check/install a recent node version >=22 + `nvm use 22` + +- setup python env +``` +pyenv local 3.12 +poetry env use 3.12 +``` + +setup yarn 2 ... +``` + + +yarn install +``` + +Now `yarn sls info` should print something like ... + +``` +$ sls info +Running "serverless" from node_modules +Environment: darwin, node 22.16.0, framework 3.40.0 (local), plugin 7.2.3, SDK 4.5.1 +Credentials: Local, "default" profile +Docs: docs.serverless.com +Support: forum.serverless.com +Bugs: github.com/serverless/serverless/issue + +``` +You'll problably see an error, if your AWS credentials are not those required for SLS. + +## TESTING + +### Run API locally +``` +ENABLE_METRICS=0 poetry run yarn sls wsgi serve +``` + +## Auditing requirements packages + +NB this is now included in tox:audit step + +``` +poetry export --all-groups --output audit.txt +poetry run pip-audit -r audit.txt -s pypi --require-hashes +poetry run pip-audit -r audit.txt -s osv --require-hashes + +poetry show {package-name} +``` + +### `safety` requires user login registration, but seems closer to dependabot in detections. +``` +poetry run safety scan +``` + +### Node +``` +yarn npm audit -R +yarn why {package-name} +yarn upgrade-interactive +``` + +## DEPLOY DEV service + +``` +AWS_PROFILE=**** poetry run yarn sls deploy --region ap-southeast-2 --stage dev +``` + +### API Feature tests +`$>poetry run pytest` should just work. + + diff --git a/nshm_model_graphql_api/__init__.py b/nshm_model_graphql_api/__init__.py index a57e31a..6abfa30 100644 --- a/nshm_model_graphql_api/__init__.py +++ b/nshm_model_graphql_api/__init__.py @@ -2,4 +2,4 @@ __author__ = """GNS Science""" __email__ = "nshm@gns.cri.nz" -__version__ = "0.3.1" +__version__ = "0.4.0" diff --git a/nshm_model_graphql_api/schema/nshm_model_sources_schema.py b/nshm_model_graphql_api/schema/nshm_model_sources_schema.py index 6dc7979..08cf7c8 100644 --- a/nshm_model_graphql_api/schema/nshm_model_sources_schema.py +++ b/nshm_model_graphql_api/schema/nshm_model_sources_schema.py @@ -6,7 +6,7 @@ import graphene import nzshm_model as nm from graphene import relay -from nzshm_model.logic_tree.source_logic_tree.version2 import logic_tree +from nzshm_model.logic_tree.source_logic_tree import logic_tree log = logging.getLogger(__name__) diff --git a/package.json b/package.json index 764aa4f..86a7e0e 100644 --- a/package.json +++ b/package.json @@ -1,6 +1,6 @@ { "name": "nshm-model-graphql-api", - "version": "0.3.1", + "version": "0.4.0", "description": "A graphql API for NSHM seismic models", "scripts": { "test": "echo \"Error: no test specified\" && exit 1", @@ -15,16 +15,15 @@ "url": "git+https://github.com/GNS-Science/nshm-tosh-api.git" }, "keywords": [], - "author": "", - "license": "", "bugs": { "url": 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b/serverless.yml @@ -72,7 +72,7 @@ custom: provider: name: aws - runtime: python3.10 + runtime: python3.12 stage: ${opt:stage, 'dev'} region: ap-southeast-2 environment: @@ -120,27 +120,10 @@ functions: - http: path: graphql/{proxy+} method: GET - # - http: - # path: admin - # method: OPTIONS - # - http: - # path: admin/{proxy+} - # method: GET - # - http: - # path: admin - # method: POST - # private: true - # - http: - # path: static - # method: OPTIONS - http: path: static/{proxy+} method: GET environment: - # ES_ENDPOINT: {"Fn::Join": ["", ["https://", "Fn::GetAtt": ["ElasticSearchInstance", "DomainEndpoint"]]]} - # ES_INDEX: ${self:custom.esIndex} - # ES_REGION: ${self:custom.region} - # ES_DOMAIN_NAME: ${self:custom.esDomainName} STACK_NAME: ${self:custom.stack_name} # warmup: # lowConcurrencyWarmer: diff --git a/setup.cfg b/setup.cfg index 64de18e..3978231 100644 --- a/setup.cfg +++ b/setup.cfg @@ -1,11 +1,9 @@ [flake8] max-line-length = 120 max-complexity = 18 -ignore = E203, E266, W503 +ignore = E203, E266, W503, D docstring-convention = google -per-file-ignores = __init__.py:F401, - tests/*.py: D100,D101,D102,D103 - nshm_model_graphql_api/schema/*.py: D102 +per-file-ignores = __init__.py:F401 exclude = .git, __pycache__, setup.py, @@ -49,11 +47,11 @@ exclude_lines = [tox:tox] isolated_build = true -envlist = py310, format, lint, build +envlist = audit, py312, format, lint, build [gh-actions] python = - 3.10: py310, format, lint, build + 3.12: py312, format, lint, build [testenv] allowlist_externals = pytest @@ -68,6 +66,14 @@ commands = # pytest nshm_model_graphql_api tests pytest --cov=pipeline --cov=nshm_model_graphql_api --cov-branch --cov-report=xml --cov-report=term-missing +[testenv:audit] +allowlist_externals = + poetry +commands = + poetry export --all-groups --output audit.txt + poetry run pip-audit -r audit.txt --require-hashes + poetry run safety scan + [testenv:format] allowlist_externals = isort diff --git a/tests/test_nzshm_model_import.py 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