NeuroGlobo_Basic - tuned for GSA - 50-80K SNPs in total (currently ~24K total variants in basic_content)
-NDD GWAS hits (~200 variants) - NDD_GWAS_hits.txt
-HGMD variants (~20K variants filtered for rsID, DM and not an indel, taken from Genomics England panel genes, KOL nominated genes and disease keywords) - NDD_HGMD_reduced.csv
-PD polygenic risk scoring variants (~2K variants) - NallsEtAl2019.PRS_gr37_PD.txt
-Houlden lab diverse population NDD variants, priority variants only (~200 variants) - Houlden.Diverse_NDD_priority.csv
-Houlden lab TTR+ amyloid variants (~80 variants) - Houlden.anyloid_TTR_variants.csv
-Asian PD variants from the Hardy / Mok lab (~200 variants) - Mok.Asian_PD.txt
-Asian AD variants from the Hardy / Mok lab (~600 variants) - Mok.Asian_PD.txt
-Corvol lab additional pharmaco genomics variants (~100 variants) - Corvol.Additional_pharmaco_variants.txt -Morris lab additional candidate variants (~60 variants) - Morris.Additional_UCL_variants.txt
-Hjelm lab mitochondrial variants (~60 variants) - Hjelm.Mito_variants.txt
-Zimprich familial variants (~40 variants) - Zimprich.Familial_variants.txt
-Kim and Abi transposons (~1K variants) - KimAndAbi.transposon_tagging_variants.csv
-Tubingen variants of interest (~60 variants) - Schulte.tubingen_variants.txt
-Narendra PARK2 variants (~40 variants) - Narendra.PARK2_variants.csv
-Craig lab NDD variants (~1K variants) - Craig.NDD_variants.csv
-NDD locus tagging variants (Sample across regions to fill out remaining beadpool, pending)