Merge pull request #117 from PBoissier/master

Add antenna position offset when using SITELOG

Author: PBoissier

CODE/shells/gnss_run_gipsyx

@@ -207,7 +207,8 @@ for station in $NODES; do
 			receiver=$($PROGDIR/sitelog2json "$SITELOG" $FID $ymd|jq '.rt' | tr -d '"')
 			antenna=$($PROGDIR/sitelog2json "$SITELOG" $FID $ymd|jq '.at' | tr -d '"')
 			posxyz=$($PROGDIR/sitelog2json "$SITELOG" $FID $ymd|jq '.px' | tr -d '"')
-			alertheader="   sitelog: $FID @ $ymd - receiver = '$receiver' - antenna = '$antenna' (will use rinex header if empty)"
+			antennaecc=$($PROGDIR/sitelog2json "$SITELOG" $FID $ymd|jq '.pe' | tr -d '"')
+			alertheader="   sitelog: $FID @ $ymd - receiver = '$receiver' - antenna = '$antenna' - antenna ecc = '$antennaecc' (will use rinex header if empty)"
 			if [ ! -z "$receiver" ]; then
 				receiver=" -O.rt \"$receiver\""
 			fi
@@ -217,6 +218,9 @@ for station in $NODES; do
 			if [ ! -z "$posxyz" ]; then
 				posxyz=" -O.px $posxyz"
 			fi
+			if [ ! -z "$antennaecc" ]; then
+				antennaecc=" -O.pe[hEN,m] $antennaecc"
+			fi
 		else
 			alertheader=''
 		fi
@@ -235,9 +239,9 @@ for station in $NODES; do
 				echo "$alertheader"
 				rm -rf $tmpdir/*
 				# makes Rinex daily file from raw data (see raw2rinex script)
-				$PROGDIR/raw2rinex "$RAW" $rinex $TEQCOPTIONS -O.mn \"$FID\" -O.mo \"$FID\" $receiver $antenna $posxyz
+				$PROGDIR/raw2rinex "$RAW" $rinex $TEQCOPTIONS -O.mn \"$FID\" -O.mo \"$FID\" $receiver $antenna $posxyz $antennaecc
 				if [[ ! -z $VERBOSE || $? != 0 ]]; then
-					echo "   $PROGDIR/raw2rinex \"$RAW\" $rinex $TEQCOPTIONS -O.mn \"$FID\" -O.mo \"$FID\" $receiver $antenna $posxyz"
+					echo "   $PROGDIR/raw2rinex \"$RAW\" $rinex $TEQCOPTIONS -O.mn \"$FID\" -O.mo \"$FID\" $receiver $antenna $posxyz $antennaecc"
 				fi
 
 				# real-time case: makes a 24h window from yesterday+today data
@@ -260,9 +264,9 @@ for station in $NODES; do
               			dd=${yesterday:8:2}
               			RAW2=$(eval "echo $FMT")
 					echo "$RAW2"
-					$PROGDIR/raw2rinex "$RAW2" $rinex2 $TEQCOPTIONS -O.mn \"$FID\" -O.mo \"$FID\" $receiver $antenna $posxyz
+					$PROGDIR/raw2rinex "$RAW2" $rinex2 $TEQCOPTIONS -O.mn \"$FID\" -O.mo \"$FID\" $receiver $antenna $posxyz $antennaecc
 					if [[ ! -z $VERBOSE || $? != 0 ]]; then
-						echo "$PROGDIR/raw2rinex \"$RAW2\" $rinex2 $TEQCOPTIONS -O.mn \"$FID\" -O.mo \"$FID\" $receiver $antenna $posxyz"
+						echo "$PROGDIR/raw2rinex \"$RAW2\" $rinex2 $TEQCOPTIONS -O.mn \"$FID\" -O.mo \"$FID\" $receiver $antenna $posxyz $antennaecc"
 					fi
 
 					#converting 2 days ago rinex
@@ -272,9 +276,9 @@ for station in $NODES; do
               			dd=${two_days_ago:8:2}
               			RAW1=$(eval "echo $FMT")
 					echo "$RAW1"
-              			$PROGDIR/raw2rinex "$RAW1" $rinex1 $TEQCOPTIONS -O.mn \"$FID\" -O.mo \"$FID\" $receiver $antenna $posxyz
+              			$PROGDIR/raw2rinex "$RAW1" $rinex1 $TEQCOPTIONS -O.mn \"$FID\" -O.mo \"$FID\" $receiver $antenna $posxyz $antennaecc
               			if [[ ! -z $VERBOSE || $? != 0 ]]; then
-       					echo "$PROGDIR/raw2rinex \"$RAW1\" $TEQCOPTIONS -O.mn \"$FID\" -O.mo \"$FID\" $receiver $antenna $posxyz"
+       					echo "$PROGDIR/raw2rinex \"$RAW1\" $TEQCOPTIONS -O.mn \"$FID\" -O.mo \"$FID\" $receiver $antenna $posxyz $antennaecc"
        				fi
 
 					mv $rinex $rinex3 #already converted rinex for today