Added sort_compass_files function

Sort compass filenames and associated tests

Using absolute path for compass_data

Update libra_toolbox/neutron_detection/activation_foils/compass.py

Co-authored-by: Rémi Delaporte-Mathurin <40028739+RemDelaporteMathurin@users.noreply.github.com>

Update libra_toolbox/neutron_detection/activation_foils/compass.py

Co-authored-by: Rémi Delaporte-Mathurin <40028739+RemDelaporteMathurin@users.noreply.github.com>

Added full set of test files

Reduced filesize

Added new test cases to test_compass

Reformatted with black

Deleted old test files

Author: cdunn314

.gitignore

@@ -161,4 +161,8 @@ cython_debug/
 #  option (not recommended) you can uncomment the following to ignore the entire idea folder.
 #.idea/
 
-**/_version.py
+**/_version.py
+
+# Compass binary file
+*.DS_Store
+settings.xml

libra_toolbox/neutron_detection/activation_foils/compass.py

@@ -1,3 +1,5 @@
+import numpy as np
+import os
 
 
 def get_channel(filename):
@@ -23,4 +25,33 @@ def get_channel(filename):
     return int(filename.split('@')[0][7:])
 
 
+def sort_compass_files(directory: str) -> dict:
+    """ Gets Compass csv data filenames
+    and sorts them according to channel and ending number.
+    The filenames need to be sorted by ending number because only
+    the first csv file for each channel contains a header.
+    
+    Example of sorted filenames in directory: 
+        1st file: Data_CH4@...22.CSV
+        2nd file: Data_CH4@...22_1.CSV
+        3rd file: Data_CH4@...22_2.CSV """
+
+    filenames = os.listdir(directory)
+    data_filenames = {}
+    for filename in filenames:
+        if filename.lower().endswith('.csv'):
+            ch = get_channel(filename)
+            # initialize filenames for each channel
+            if ch not in data_filenames.keys():
+                data_filenames[ch] = []
+
+            data_filenames[ch].append(filename)
+    # Sort filenames by number at end
+    for ch in data_filenames.keys():
+        data_filenames[ch] = np.sort(data_filenames[ch])
+
+    return data_filenames
+
+
+