ot_ws_wrapper NoneType #137
Description
command:
physcraper_run.py -s ot_350 -t Tr53297 -tb -db PATH_TO_LOCAL -as "nexus" -o ot_350
File "/root/physcraper_27072020/venv3/bin/physcraper_run.py", line 7, in
exec(compile(f.read(), file, 'exec'))
File "/root/physcraper_27072020/physcraper-main/bin/physcraper_run.py", line 220, in
scraper.calculate_final_tree(boot_reps = boot_reps)
File "/root/physcraper_27072020/physcraper-main/physcraper/scrape.py", line 1218, in calculate_final_tree
self.replace_tre(sumtreepath, schema="nexus")
File "/root/physcraper_27072020/physcraper-main/physcraper/scrape.py", line 959, in replace_tre
rooted_tre = root_tree_from_synth(newtre, self.data.otu_dict)
File "/root/physcraper_27072020/physcraper-main/physcraper/opentree_helpers.py", line 54, in root_tree_from_synth
tax_mrca = OT.taxon_mrca(spp).response_dict['mrca']['ott_id']
File "/root/physcraper_27072020/venv3/src/opentree/opentree/ot_object.py", line 263, in taxon_mrca
call_record = self.ws.taxonomy_mrca(ott_ids=ott_ids)
File "/root/physcraper_27072020/venv3/src/opentree/opentree/ot_ws_wrapper.py", line 79, in taxonomy_mrca
d = {"ott_ids": [int(i) for i in ott_ids]}
File "/root/physcraper_27072020/venv3/src/opentree/opentree/ot_ws_wrapper.py", line 79, in
d = {"ott_ids": [int(i) for i in ott_ids]}
TypeError: int() argument must be a string, a bytes-like object or a number, not 'NoneType'