From d0c2e60d3db39d0cfdd471500bf213e161fa13eb Mon Sep 17 00:00:00 2001 From: Silas Kieser Date: Mon, 24 Jun 2024 15:05:05 +0200 Subject: [PATCH] fix #340 --- mag_annotator/database_processing.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/mag_annotator/database_processing.py b/mag_annotator/database_processing.py index 306315d6..943d32dd 100644 --- a/mag_annotator/database_processing.py +++ b/mag_annotator/database_processing.py @@ -373,7 +373,7 @@ def process_vogdb(vog_hmm_targz, output_dir='.', logger=LOGGER, version=DEFAULT_ vogdb_targz = tarfile.open(vog_hmm_targz) vogdb_targz.extractall(hmm_dir) vog_hmms = path.join(output_dir, f'vog_{version}_hmms.txt') - merge_files(glob(path.join(hmm_dir, 'VOG*.hmm')), vog_hmms) + merge_files(glob(path.join(hmm_dir, 'hmm/VOG*.hmm')), vog_hmms) run_process(['hmmpress', '-f', vog_hmms], logger, verbose=verbose) LOGGER.info('VOGdb database processed') return {'vogdb': vog_hmms}