waterz/pyproject.toml at master · ZettaAI/waterz · GitHub

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[build-system]
requires = [
	"setuptools>=69",
	"wheel",
	"Cython>=0.29",
	"numpy>=1.20",
	"setuptools-scm",
]
build-backend = "setuptools.build_meta"

[tool.setuptools_scm]

[project]
name = "waterz"
dynamic = ["version"]
description = "Simple watershed and agglomeration for affinity graphs."
readme = "README.md"
requires-python = ">=3.9"
license = "MIT"
authors = [{ name = "Jan Funke" }, { name = "Jingpeng Wu" }]
classifiers = [
	"Programming Language :: Python :: 3",
	"Programming Language :: Python :: 3.9",
	"Programming Language :: Python :: 3.10",
	"Programming Language :: Python :: 3.11",
	"Programming Language :: Python :: 3.12",
	"Programming Language :: Python :: 3.13",
	"Operating System :: OS Independent",
	"Typing :: Typed",
]
dependencies = ["numpy>=1.20", "witty[cython]>=0.3.1"]

[project.urls]
Homepage = "https://github.com/funkey/waterz"
Repository = "https://github.com/funkey/waterz"
Issues = "https://github.com/funkey/waterz/issues"

[dependency-groups]
dev = [
	"pytest",
	"coveralls",
	"pytest-cov",
	"pre-commit",
	"ruff",
	"numpy",
	"ipython>=8.18.1",
	"Cython>=0.29",
	"setuptools",
]

[tool.uv.sources]
waterz = { workspace = true }

[tool.setuptools]
package-dir = { "" = "src" }
include-package-data = true

[tool.setuptools.packages.find]
where = ["src"]

[tool.setuptools.package-data]
waterz = ["*.pyx", "*.hpp", "*.h", "backend/*.hpp"]


# https://docs.astral.sh/ruff/
[tool.ruff]
line-length = 95
target-version = "py39"
src = ["src", "tests"]
fix = true
unsafe-fixes = true

[tool.ruff.lint]
select = [
	"E",    # style errors
	"F",    # flakes
	"W",    # warnings
	"I",    # isort
	"UP",   # pyupgrade
	"S",    # bandit
	"C4",   # flake8-comprehensions
	"B",    # flake8-bugbear
	"A001", # flake8-builtins
	"TC",   # flake8-typecheck
	"TID",  # flake8-tidy-imports
	"RUF",  # ruff-specific rules
]

[tool.ruff.lint.per-file-ignores]
"tests/*.py" = ["D", "S", "RUF012"]