From 23476756773c4231b8ccb238ba83419263538973 Mon Sep 17 00:00:00 2001 From: Mit Kotak <53411468+mitkotak@users.noreply.github.com> Date: Thu, 5 Jan 2023 18:20:46 -0600 Subject: [PATCH 1/8] testing "is_cvmfs" parameter --- manifest.json | 1 + 1 file changed, 1 insertion(+) diff --git a/manifest.json b/manifest.json index e1c34b6..6e2e490 100644 --- a/manifest.json +++ b/manifest.json @@ -1,6 +1,7 @@ { "name": "hello world", "container": "python", + "is_cvmfs": true, "pre_processing_stage": "bash lookaround.sh", "execution_stage": "/cvmfs/cybergis.illinois.edu/software/conda/cybergisx/python3-0.9.0/bin/python pi.py", "post_processing_stage": "ls", From 4273cc8ef27b3e0051c14862e1c36b9c7e065ce6 Mon Sep 17 00:00:00 2001 From: Mit Kotak <53411468+mitkotak@users.noreply.github.com> Date: Wed, 18 Jan 2023 13:07:37 -0600 Subject: [PATCH 2/8] "is_cvmfs" -> "connector" --- manifest.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/manifest.json b/manifest.json index 6e2e490..1bd1492 100644 --- a/manifest.json +++ b/manifest.json @@ -1,7 +1,7 @@ { "name": "hello world", "container": "python", - "is_cvmfs": true, + "connector": "SingCVMFSConnector", "pre_processing_stage": "bash lookaround.sh", "execution_stage": "/cvmfs/cybergis.illinois.edu/software/conda/cybergisx/python3-0.9.0/bin/python pi.py", "post_processing_stage": "ls", From 012536d3adae49866c8d9c53481db6ce868b5d6a Mon Sep 17 00:00:00 2001 From: Mit Kotak <53411468+mitkotak@users.noreply.github.com> Date: Tue, 7 Feb 2023 17:58:50 -0600 Subject: [PATCH 3/8] container "python" -> "cybergisx/0.8.0" --- manifest.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/manifest.json b/manifest.json index 1bd1492..a9bbbf3 100644 --- a/manifest.json +++ b/manifest.json @@ -1,6 +1,6 @@ { "name": "hello world", - "container": "python", + "container": "cybergisx/0.8.0", "connector": "SingCVMFSConnector", "pre_processing_stage": "bash lookaround.sh", "execution_stage": "/cvmfs/cybergis.illinois.edu/software/conda/cybergisx/python3-0.9.0/bin/python pi.py", From 677e477843c20681e420f34f5ace0c3d76119440 Mon Sep 17 00:00:00 2001 From: Mit Kotak <53411468+mitkotak@users.noreply.github.com> Date: Tue, 14 Feb 2023 11:11:11 -0600 Subject: [PATCH 4/8] removed executable --- manifest.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/manifest.json b/manifest.json index a9bbbf3..4c70ca6 100644 --- a/manifest.json +++ b/manifest.json @@ -3,7 +3,7 @@ "container": "cybergisx/0.8.0", "connector": "SingCVMFSConnector", "pre_processing_stage": "bash lookaround.sh", - "execution_stage": "/cvmfs/cybergis.illinois.edu/software/conda/cybergisx/python3-0.9.0/bin/python pi.py", + "execution_stage": "python pi.py", "post_processing_stage": "ls", "slurm_input_rules": { "time": { From 56d85bdaf4217fd59f95c89f14f4674e8b8afc8c Mon Sep 17 00:00:00 2001 From: Mit Kotak <53411468+mitkotak@users.noreply.github.com> Date: Tue, 14 Feb 2023 11:27:20 -0600 Subject: [PATCH 5/8] added which python --- manifest.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/manifest.json b/manifest.json index 4c70ca6..b38f564 100644 --- a/manifest.json +++ b/manifest.json @@ -3,7 +3,7 @@ "container": "cybergisx/0.8.0", "connector": "SingCVMFSConnector", "pre_processing_stage": "bash lookaround.sh", - "execution_stage": "python pi.py", + "execution_stage": "which python && python pi.py", "post_processing_stage": "ls", "slurm_input_rules": { "time": { From 8b7ea7d819261c1d7581c8b5ee25251e6c058941 Mon Sep 17 00:00:00 2001 From: Mit Kotak <53411468+mitkotak@users.noreply.github.com> Date: Tue, 14 Feb 2023 11:53:01 -0600 Subject: [PATCH 6/8] removed which --- manifest.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/manifest.json b/manifest.json index b38f564..4c70ca6 100644 --- a/manifest.json +++ b/manifest.json @@ -3,7 +3,7 @@ "container": "cybergisx/0.8.0", "connector": "SingCVMFSConnector", "pre_processing_stage": "bash lookaround.sh", - "execution_stage": "which python && python pi.py", + "execution_stage": "python pi.py", "post_processing_stage": "ls", "slurm_input_rules": { "time": { From b5952f07fcb96520f0cc25098400e6bf41e1b174 Mon Sep 17 00:00:00 2001 From: Mit Kotak <53411468+mitkotak@users.noreply.github.com> Date: Tue, 14 Feb 2023 12:43:05 -0600 Subject: [PATCH 7/8] added matplotlib.pyplot --- pi.py | 1 + 1 file changed, 1 insertion(+) diff --git a/pi.py b/pi.py index ea44233..be5c7a6 100644 --- a/pi.py +++ b/pi.py @@ -1,4 +1,5 @@ import random +import matplotlib.pyplot as plt print(f"Random is at: {random.__file__}") INTERVAL = 1000 From 58725ab73e74c7eb67ee05a7747cc1d1af62ef60 Mon Sep 17 00:00:00 2001 From: Mit Kotak <53411468+mitkotak@users.noreply.github.com> Date: Thu, 23 Feb 2023 14:36:03 -0600 Subject: [PATCH 8/8] changed kernel name --- manifest.json | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/manifest.json b/manifest.json index 4c70ca6..258a348 100644 --- a/manifest.json +++ b/manifest.json @@ -1,6 +1,6 @@ { "name": "hello world", - "container": "cybergisx/0.8.0", + "container": "cybergisx/python3-0.8.0", "connector": "SingCVMFSConnector", "pre_processing_stage": "bash lookaround.sh", "execution_stage": "python pi.py",