diff --git a/ciftify/bin/ciftify_clean_img.py b/ciftify/bin/ciftify_clean_img.py index eac595f..60f9f0e 100755 --- a/ciftify/bin/ciftify_clean_img.py +++ b/ciftify/bin/ciftify_clean_img.py @@ -342,7 +342,7 @@ def clean_image_with_nilearn(input_img, confound_signals, settings): clean_output = nilearn.image.clean_img(input_img, detrend=settings.detrend, standardize=settings.standardize, - confounds=confound_signals.values, + confounds=confound_signals.values if confound_signals is not None else None, low_pass=settings.low_pass, high_pass=settings.high_pass, t_r=settings.func.tr)