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.gitignore

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syntax: glob
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.DS_Store
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.project
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*.cov
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*_restart
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*.s_point
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*.wells
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*.wells_debug
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*_[0-9]
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*.dat
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*.json
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*.yaml
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output.dat
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# MADS files
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obj
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bin
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wells
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.project
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.cproject
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*.exe
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*.o
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*.dylib
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*.so
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*.so.1
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*.results
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*iterationresults
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*.intermediate_residuals
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*.intermediate_results
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*lmjacobian.dat
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*intermediate.mads
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*-rerun.mads
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*-error.mads
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*-truth.mads
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*.mads-input
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*.*-restart-*
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*.restart_*
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*.restart_info
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*.cmdline_hist
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*.eigen*
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*.covar*
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*.correl*
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*.residu*
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*.jacob*
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*.gsens*
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*.lsens*
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*.igrnd*
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*.ppsd*
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*.igdp*
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*.mcrnd*
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*.pssa*
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*.abagus*
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*.forward
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*.archive
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*.runs
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*.phi
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*.seed
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*.seed0
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*debug*
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*.running
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*.s_point
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*.s_well
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*.ofe
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*.igpd-opt*
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*.mads_output_*
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*.outp-*
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*.vtk
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*.btc
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*.btc-peak
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*.btc2
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*.out
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*.sobol_sens_index
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*.sobol_sens_total
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*output
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*.wells
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# Genereal files
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*.dat
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*.zip
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*.tar
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*.tgz
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*.gz
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*.pdf
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*.txt
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*.doc
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*.docx
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*.swp
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*.pars
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*.bgr
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*.o
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*.eas
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*.par
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*.ctl
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*.ps
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*.dbg
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*.sh
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*.a
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*.so
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*.zip
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*.orig
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# LINUX files
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.nfs*
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# MAC files
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._*
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._.*
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.DS*
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# PEST files
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*.cnd
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*.drf
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*.jac
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*.jco
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*.jst
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*.mtt
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*.rec
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*.rei
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*.res
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*.rst
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*.sen
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*.seo
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svrmodels
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*.svr
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*madsjl_cmdline_hist*
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examples/anasol/test.mads
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examples/model_coupling_*
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*/.ipynb_checkpoints/*

.travis.yml

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language: julia
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os:
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- osx
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- linux
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julia:
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- 0.5
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notifications:
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email: false
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script:
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- if [[ -a .git/shallow ]]; then git fetch --unshallow; fi
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- julia -e 'Pkg.clone(pwd());'
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# - julia -e 'ENV["MADS_NO_PYTHON"]=""; ENV["MADS_NO_PLOT"]=""; Pkg.build("Mads"); Pkg.test("Mads"; coverage=true)'
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- julia -e 'Pkg.build("DocumentFunction"); Pkg.test("DocumentFunction"; coverage=true)'
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after_success:
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- julia -e 'cd(Pkg.dir("DocumentFunction")); Pkg.add("Coverage"); using Coverage; Coveralls.submit(Coveralls.process_folder())'

ACKNOWLEDGMENTS.md

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ACKNOWLEDGMENTS
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==============
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MADS development has been supported by:
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* Los Alamos National Laboratory Environmental Programs (LANL-ADEP)
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* Los Alamos National Laboratory Exploratory Research (LANL-ER)
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* Department of Energy (DOE) DiaMonD project: An Integrated Multifaceted Approach to Mathematics at the Interfaces of Data, Models, and Decisions

COPYING.md

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MADS: Model Analysis & Decision Support in Julia (Mads.jl v1.0) 2016
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---------------
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Licensing: GPLv3: http://www.gnu.org/licenses/gpl-3.0.html
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Copyright 2016. Los Alamos National Security, LLC. All rights reserved.
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Copyright 2016. Los Alamos National Security, LLC. This material was produced under U.S. Government contract DE-AC52-06NA25396 for Los Alamos National Laboratory (LANL), which is operated by Los Alamos National Security, LLC for the U.S. Department of Energy. The U.S. Government has rights to use, reproduce, and distribute this software. NEITHER THE GOVERNMENT NOR LOS ALAMOS NATIONAL SECURITY, LLC MAKES ANY WARRANTY, EXPRESS OR IMPLIED, OR ASSUMES ANY LIABILITY FOR THE USE OF THIS SOFTWARE. If software is modified to produce derivative works, such modified software should be clearly marked, so as not to confuse it with the version available from LANL.
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Additionally, this program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. Accordingly, this program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
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LA-CC-15-080; Copyright Number Assigned: C16008

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