cellPACK_data/packing_parameters.json at master · mesoscope/cellPACK_data · GitHub

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{
    "computeGridParams": {
        "name": "computeGridParams",
        "default": true,
        "value": true,
        "width": 100,
        "type": "bool",
        "description": "compute Grid Params"
    },
    "pickRandPt": {
        "name": "pickRandPt",
        "default": true,
        "value": true,
        "width": 200,
        "type": "bool",
        "description": "Pick drop position point randomly"
    },
    "cancelDialog": {
        "name": "cancelDialog",
        "default": false,
        "value": false,
        "width": 30,
        "type": "bool",
        "description": "compute Grid Params"
    },
    "_hackFreepts": {
        "name": "_hackFreepts",
        "default": false,
        "value": false,
        "width": 30,
        "type": "bool",
        "description": "no free point update"
    },
    "pickWeightedIngr": {
        "name": "pickWeightedIngr",
        "default": true,
        "value": true,
        "width": 200,
        "type": "bool",
        "description": "Prioritize ingredient selection by packingWeight"
    },
    "windowsSize": {
        "name": "windowsSize",
        "default": 100,
        "value": 100,
        "width": 30,
        "type": "int",
        "description": "windows Size"
    },
    "use_gradient": {
        "name": "use_gradient",
        "default": false,
        "value": false,
        "width": 150,
        "type": "bool",
        "description": "Use gradients if defined"
    },
    "placeMethod": {
        "name": "placeMethod",
        "default": "placeMethod",
        "value": "jitter",
        "width": 30,
        "values": [
            "jitter",
            "spring",
            "rigid-body",
            "pandaBullet",
            "pandaBulletRelax",
            "pandaDev",
            "RAPID"
        ],
        "type": "liste",
        "description": "     Overriding Packing Method = "
    },
    "saveResult": {
        "name": "saveResult",
        "default": false,
        "value": false,
        "width": 200,
        "type": "bool",
        "description": "Save packing result to .apr file (enter full path below):"
    },
    "ingrLookForNeighbours": {
        "name": "ingrLookForNeighbours",
        "default": false,
        "value": false,
        "width": 30,
        "type": "bool",
        "description": "Look for ingredients attractor and partner"
    },
    "runTimeDisplay": {
        "name": "runTimeDisplay",
        "default": false,
        "value": false,
        "width": 150,
        "type": "bool",
        "description": "Display packing in realtime (slow)"
    },
    "_timer": {
        "name": "_timer",
        "default": false,
        "value": false,
        "width": 30,
        "type": "bool",
        "description": "evaluate time per function"
    },
    "freePtsUpdateThrehod": {
        "mini": 0,
        "maxi": 1,
        "name": "freePtsUpdateThrehod",
        "width": 30,
        "default": 0.15,
        "type": "float",
        "value": 0.15,
        "description": "Mask grid while packing (0=always | 1=never)"
    },
    "overwritePlaceMethod": {
        "name": "overwritePlaceMethod",
        "default": false,
        "value": false,
        "width": 300,
        "type": "bool",
        "description": "Overwrite per-ingredient packing method with Overriding Packing Method:"
    },
    "innerGridMethod": {
        "name": "innerGridMethod",
        "default": "innerGridMethod",
        "value": "bhtree",
        "width": 30,
        "values": [
            "bhtree",
            "sdf",
            "jordan",
            "jordan3",
            "pyray",
            "floodfill"
        ],
        "type": "liste",
        "description": "     Method to calculate the inner grid:"
    },
    "largestProteinSize": {
        "name": "largestProteinSize",
        "default": 0,
        "value": 0,
        "width": 30,
        "type": "int",
        "description": "largest Protein Size"
    },
    "gradients": {
        "name": "gradients",
        "default": "",
        "value": "",
        "width": 150,
        "values": [],
        "type": "liste",
        "description": "Gradients available"
    },
    "resultfile": {
        "name": "resultfile",
        "default": "fillResult",
        "value": "fillResult",
        "width": 200,
        "type": "filename",
        "description": "result filename"
    },
    "smallestProteinSize": {
        "mini": 1,
        "maxi": 1000,
        "name": "smallestProteinSize",
        "width": 30,
        "default": 15,
        "type": "int",
        "value": 15,
        "description": "Smallest ingredient packing radius override (low=accurate | high=fast)"
    },
    "use_periodicity": {
        "name": "use_periodicity",
        "default": false,
        "value": false,
        "width": 200,
        "type": "bool",
        "description": "Use periodic condition"
    },
    "EnviroOnly": {
        "name": "EnviroOnly",
        "default": false,
        "value": false,
        "width": 30,
        "type": "bool",
        "description": "Histo volume Only"
    }
}