diff --git a/pulsar/init.sh b/pulsar/init.sh index 26b1373..3763e2d 100644 --- a/pulsar/init.sh +++ b/pulsar/init.sh @@ -22,7 +22,7 @@ docker_run \ -v "${PULSAR_ROOT}:/pulsar" \ -v "${root}/pulsar/venv:/pulsar/.venv" \ "$PULSAR_IMAGE" \ - ./.venv/bin/pip install -e . + ./.venv/bin/pip install -e . --config-settings editable_mode=compat log "Installing Pulsar additional dependencies" docker_run \ diff --git a/remote-galaxy/init.sh b/remote-galaxy/init.sh index b748b2e..a786cda 100644 --- a/remote-galaxy/init.sh +++ b/remote-galaxy/init.sh @@ -18,5 +18,7 @@ log "Updating remote Galaxy venv for remote metadata" docker_run \ -v "${GALAXY_ROOT}:/remote-galaxy:ro" \ -v "${root}/remote-galaxy/venv:/remote-galaxy/.venv" \ + -v "${root}/galaxy/config/galaxy.yml:/remote-galaxy/config/galaxy.yml:ro" \ + -v "${root}/galaxy/config/job_conf.yml:/remote-galaxy/config/job_conf.yml:ro" \ "$PULSAR_IMAGE" \ bash ./scripts/common_startup.sh --skip-client-build