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Debug ZETTA_REPO_ACCESS_TOKEN and Permissions #4

Debug ZETTA_REPO_ACCESS_TOKEN and Permissions

Debug ZETTA_REPO_ACCESS_TOKEN and Permissions #4

Workflow file for this run

name: Debug ZETTA_REPO_ACCESS_TOKEN and Permissions
on:
workflow_dispatch:
jobs:
debug-token-and-permissions:
runs-on: ${{ vars.UBUNTU_VERSION }}
env:
ZETTA_REPO_ACCESS_TOKEN: ${{ secrets.ZETTA_REPO_ACCESS_TOKEN }}
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 1
- name: Show runner and workflow context
run: |
echo "Runner: $(uname -a)"
echo "GitHub Actor: $GITHUB_ACTOR"
echo "Workflow: $GITHUB_WORKFLOW"
echo "Event: $GITHUB_EVENT_NAME"
echo "Repository: $GITHUB_REPOSITORY"
echo "Job: $GITHUB_JOB"
echo "Workspace: $GITHUB_WORKSPACE"
echo "Home: $HOME"
echo "Shell: $SHELL"
echo "GitHub Ref: $GITHUB_REF"
echo "GitHub SHA: $GITHUB_SHA"
echo "GitHub Run ID: $GITHUB_RUN_ID"
echo "GitHub Run Number: $GITHUB_RUN_NUMBER"
- name: Show GitHub Actions permissions
run: |
echo "Permissions JSON:"
cat $GITHUB_EVENT_PATH | jq '.workflow_run?.permissions // .permissions // "No permissions found"'
- name: Check ZETTA_REPO_ACCESS_TOKEN presence and length
run: |
if [ -z "$ZETTA_REPO_ACCESS_TOKEN" ]; then
echo "ZETTA_REPO_ACCESS_TOKEN is NOT set"
exit 1
else
echo "ZETTA_REPO_ACCESS_TOKEN is set"
echo "Length: ${#ZETTA_REPO_ACCESS_TOKEN}"
echo "First 4 chars: ${ZETTA_REPO_ACCESS_TOKEN:0:4}"
fi
- id: get_ci_core_xetabase_branch
name: "Get CI-CORE current branch for Xetabase from target branch"
run: |
chmod +x ./.github/workflows/scripts/get_opencga_enterprise_branch.sh
echo "secrets.ZETTA_REPO_ACCESS_TOKEN: ${{ secrets.ZETTA_REPO_ACCESS_TOKEN }}"
xetabase_branch=$(./.github/workflows/scripts/get_opencga_enterprise_branch.sh "java-common-libs" "develop" "TASK-8067")
echo "__CI CORE Xetabase ref:__ \"${xetabase_branch}\"" | tee -a ${GITHUB_STEP_SUMMARY}
REPO_URI="https://$ZETTA_REPO_ACCESS_TOKEN@github.com/zetta-genomics/opencga-enterprise.git"
echo "$(git ls-remote "$REPO_URI" "TASK-8067")"
env:
ZETTA_REPO_ACCESS_TOKEN: ${{ secrets.ZETTA_REPO_ACCESS_TOKEN }}
- id: get_xetabase_branch
name: "Get JCL current branch for Xetabase from target branch"
run: |
chmod +x ./.github/workflows/scripts/get-xetabase-branch.sh
echo "github.event.pull_request.base.ref: develop"
echo "github.event.pull_request.head.ref: TASK-8067"
echo "secrets.ZETTA_REPO_ACCESS_TOKEN: ${{ secrets.ZETTA_REPO_ACCESS_TOKEN }}"
xetabase_branch=$(./.github/workflows/scripts/get-xetabase-branch.sh "develop" "TASK-8067")
echo "__Xetabase ref:__ \"${xetabase_branch}\"" | tee -a ${GITHUB_STEP_SUMMARY}
env:
ZETTA_REPO_ACCESS_TOKEN: ${{ secrets.ZETTA_REPO_ACCESS_TOKEN }}
- name: Clone OpenCGA Enterprise branch '${{ inputs.branch }}'
uses: actions/checkout@v4
with:
repository: zetta-genomics/opencga-enterprise
ref: TASK-8067
token: ${{ env.ZETTA_REPO_ACCESS_TOKEN }}
path: opencga-enterprise
fetch-depth: "10"
- name: Try to clone the private repo with token
run: |
set -x
git clone https://$ZETTA_REPO_ACCESS_TOKEN@github.com/zetta-genomics/opencga-enterprise.git || true
- name: Show authenticated user (if possible)
run: |
curl -H "Authorization: token $ZETTA_REPO_ACCESS_TOKEN" https://api.github.com/user
- name: Show environment variables (filtered)
run: |
env | grep -E 'GITHUB|ZETTA|RUNNER|CI'