diff --git a/pipelines/Dockerfile_by_Ryan_Wick/Dockerfile b/pipelines/Dockerfile_by_Ryan_Wick/Dockerfile index d977f3e..4051cc5 100644 --- a/pipelines/Dockerfile_by_Ryan_Wick/Dockerfile +++ b/pipelines/Dockerfile_by_Ryan_Wick/Dockerfile @@ -2,7 +2,7 @@ FROM mambaorg/micromamba:latest # Create an "autocycler" environment with long-read assemblers. RUN micromamba create -y -n autocycler python=3.12 -c conda-forge -c bioconda curl && \ - for tool in canu flye lja metamdbg miniasm minimap2 minipolish3 necat nextdenovo nextpolish racon raven-assembler wtdbg; do \ + for tool in canu flye lja metamdbg miniasm minimap2 minipolish necat nextdenovo nextpolish racon raven-assembler wtdbg; do \ if micromamba install -y -n autocycler -c conda-forge -c bioconda "$tool"; then \ printf " $tool" >> /tmp/installed_tools.txt; \ else \