The sailsprep repo

Welcome to the sailsprep repo! This is a Python repo for doing incredible video-based human pose estimation analyses. STAY TUNED!

Caution:: this package is still under development and may change rapidly over the next few weeks.

This will convert the raw video into BIDS format in a clean fashion.

Features

• A few
• Cool
• Things
• These may include a wonderful CLI interface.

Installation

To manage dependencies, this project uses Poetry. Make sure you've got poetry installed. On Engaging, you need to first run at the root of the repo :

module load miniforge
pip install poetry
poetry install

The BIDS-conversion tool of sailsprep requires FFmpeg ≥ 6.0 compiled with the vidstab library. Because FFmpeg compiled with vidstab is not a Python package, it must be installed separately. You'll need to run (outside any environment):

cd ~
wget https://johnvansickle.com/ffmpeg/releases/ffmpeg-release-amd64-static.tar.xz
tar -xJf ffmpeg-release-amd64-static.tar.xz
mv ffmpeg-*-static ffmpeg_static
export PATH="$HOME/ffmpeg_static:$PATH"

Get the newest development version via:

pip install git+https://github.com/sensein/sailsprep.git

Quick start

Tools developped in sailsprep

Tool	Documentation
BIDS-conversion	link to documentation

Contributing

We welcome contributions from the community! Before getting started, please review our CONTRIBUTING.md.

To do:

• A
• lot
• !