From fa121f896bda7e2540b610a089031d6747ac427b Mon Sep 17 00:00:00 2001 From: "dependabot[bot]" <49699333+dependabot[bot]@users.noreply.github.com> Date: Sun, 1 Feb 2026 07:35:35 +0000 Subject: [PATCH] Bump the all-minor-and-patch-dependency-updates group with 9 updates Bumps the all-minor-and-patch-dependency-updates group with 9 updates: | Package | From | To | | --- | --- | --- | | [bandit](https://github.com/PyCQA/bandit) | `1.9.2` | `1.9.3` | | [setuptools](https://github.com/pypa/setuptools) | `80.9.0` | `80.10.2` | | [ruff](https://github.com/astral-sh/ruff) | `0.14.7` | `0.14.14` | | [pytest](https://github.com/pytest-dev/pytest) | `9.0.1` | `9.0.2` | | [gitpython](https://github.com/gitpython-developers/GitPython) | `3.1.45` | `3.1.46` | | [cachetools](https://github.com/tkem/cachetools) | `6.2.1` | `6.2.6` | | [build](https://github.com/pypa/build) | `1.3.0` | `1.4.0` | | [tox](https://github.com/tox-dev/tox) | `4.32.0` | `4.34.1` | | [sphinx](https://github.com/sphinx-doc/sphinx) | `9.0.0` | `9.0.4` | Updates `bandit` from 1.9.2 to 1.9.3 - [Release notes](https://github.com/PyCQA/bandit/releases) - [Commits](https://github.com/PyCQA/bandit/compare/1.9.2...1.9.3) Updates `setuptools` from 80.9.0 to 80.10.2 - [Release notes](https://github.com/pypa/setuptools/releases) - [Changelog](https://github.com/pypa/setuptools/blob/main/NEWS.rst) - [Commits](https://github.com/pypa/setuptools/compare/v80.9.0...v80.10.2) Updates `ruff` from 0.14.7 to 0.14.14 - [Release notes](https://github.com/astral-sh/ruff/releases) - [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md) - [Commits](https://github.com/astral-sh/ruff/compare/0.14.7...0.14.14) Updates `pytest` from 9.0.1 to 9.0.2 - [Release notes](https://github.com/pytest-dev/pytest/releases) - [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst) - [Commits](https://github.com/pytest-dev/pytest/compare/9.0.1...9.0.2) Updates `gitpython` from 3.1.45 to 3.1.46 - [Release notes](https://github.com/gitpython-developers/GitPython/releases) - [Changelog](https://github.com/gitpython-developers/GitPython/blob/main/CHANGES) - [Commits](https://github.com/gitpython-developers/GitPython/compare/3.1.45...3.1.46) Updates `cachetools` from 6.2.1 to 6.2.6 - [Changelog](https://github.com/tkem/cachetools/blob/master/CHANGELOG.rst) - [Commits](https://github.com/tkem/cachetools/compare/v6.2.1...v6.2.6) Updates `build` from 1.3.0 to 1.4.0 - [Release notes](https://github.com/pypa/build/releases) - [Changelog](https://github.com/pypa/build/blob/main/CHANGELOG.rst) - [Commits](https://github.com/pypa/build/compare/1.3.0...1.4.0) Updates `tox` from 4.32.0 to 4.34.1 - [Release notes](https://github.com/tox-dev/tox/releases) - [Changelog](https://github.com/tox-dev/tox/blob/main/docs/changelog.rst) - [Commits](https://github.com/tox-dev/tox/compare/4.32.0...4.34.1) Updates `sphinx` from 9.0.0 to 9.0.4 - [Release notes](https://github.com/sphinx-doc/sphinx/releases) - [Changelog](https://github.com/sphinx-doc/sphinx/blob/v9.0.4/CHANGES.rst) - [Commits](https://github.com/sphinx-doc/sphinx/compare/v9.0.0...v9.0.4) --- updated-dependencies: - dependency-name: bandit dependency-version: 1.9.3 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: all-minor-and-patch-dependency-updates - dependency-name: setuptools dependency-version: 80.10.2 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: all-minor-and-patch-dependency-updates - dependency-name: ruff dependency-version: 0.14.14 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: all-minor-and-patch-dependency-updates - dependency-name: pytest dependency-version: 9.0.2 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: all-minor-and-patch-dependency-updates - dependency-name: gitpython dependency-version: 3.1.46 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: all-minor-and-patch-dependency-updates - dependency-name: cachetools dependency-version: 6.2.6 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: all-minor-and-patch-dependency-updates - dependency-name: build dependency-version: 1.4.0 dependency-type: direct:production update-type: version-update:semver-minor dependency-group: all-minor-and-patch-dependency-updates - dependency-name: tox dependency-version: 4.34.1 dependency-type: direct:development update-type: version-update:semver-minor dependency-group: all-minor-and-patch-dependency-updates - dependency-name: sphinx dependency-version: 9.0.4 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: all-minor-and-patch-dependency-updates ... Signed-off-by: dependabot[bot] --- requirements/build.txt | 4 ++-- requirements/dev.txt | 4 ++-- requirements/docs.txt | 2 +- requirements/prd.txt | 2 +- requirements/test.txt | 8 ++++---- 5 files changed, 10 insertions(+), 10 deletions(-) diff --git a/requirements/build.txt b/requirements/build.txt index c661848..d9c5b6f 100644 --- a/requirements/build.txt +++ b/requirements/build.txt @@ -1,3 +1,3 @@ -build==1.3.0 -setuptools==80.9.0 +build==1.4.0 +setuptools==80.10.2 setuptools_scm[toml]==9.2.2 diff --git a/requirements/dev.txt b/requirements/dev.txt index 3b662b9..5b9079e 100644 --- a/requirements/dev.txt +++ b/requirements/dev.txt @@ -1,2 +1,2 @@ -tox==4.32.0 -GitPython==3.1.45 +tox==4.34.1 +GitPython==3.1.46 diff --git a/requirements/docs.txt b/requirements/docs.txt index 9dfa820..be61f9d 100644 --- a/requirements/docs.txt +++ b/requirements/docs.txt @@ -1,4 +1,4 @@ -r dev.txt -sphinx==9.0.0 +sphinx==9.0.4 diff --git a/requirements/prd.txt b/requirements/prd.txt index 142de54..24861b0 100644 --- a/requirements/prd.txt +++ b/requirements/prd.txt @@ -11,4 +11,4 @@ plotly-express==0.4.1 biopython==1.86 rdkit==2025.9.1 pillow==11.2.1 -cachetools==6.2.1 \ No newline at end of file +cachetools==6.2.6 \ No newline at end of file diff --git a/requirements/test.txt b/requirements/test.txt index fcc6331..bfc9a1e 100644 --- a/requirements/test.txt +++ b/requirements/test.txt @@ -1,6 +1,6 @@ -bandit==1.9.2 -ruff==0.14.7 -pytest==9.0.1 +bandit==1.9.3 +ruff==0.14.14 +pytest==9.0.2 pytest-cov==7.0.0 -GitPython==3.1.45 +GitPython==3.1.46 pytest-mock==3.15.1 \ No newline at end of file