scverse / muon Star 252 Code Issues Pull requests Discussions muon is a multimodal omics Python framework muon scrna-seq multi-omics multimodal-data cite-seq scanpy scatac-seq anndata multimodal-omics-analysis mudata scverse Updated Oct 22, 2025 Python
scverse / mudata Star 97 Code Issues Pull requests Multimodal Data (.h5mu) implementation for Python genomics muon data-analysis multi-omics anndata multimodal-omics-analysis mudata scverse Updated Oct 29, 2025 Python
bioFAM / mofaflex Star 21 Code Issues Pull requests Discussions factor models for omics data bioinformatics single-cell factor-analysis multi-omics muvi mofa multimodal-omics-analysis Updated Oct 30, 2025 Python