garikoitz/prfsynth Does not work on Apple Silicon

[Gilles86]

Hey,

Would it be possible to compile the Matlab code that is needed to simulate PRF data on ARM64?

Right now I cannot run the garikoitz/prfsynth-docker on my Macbook:

docker run --rm -it \
    -v "$script_dir/$json_file:/flywheel/v0/input/config.json" \
    -v "$basedir:/flywheel/v0/output" \
    garikoitz/prfsynth

WARNING: The requested image's platform (linux/amd64) does not match the detected host platform (linux/arm64/v8) and no specific platform was requested
[garikoitz/prfsynth]     Initialized.
[garikoitz/prfsynth]     See detailed usage here: https://github.com/vistalab/PRFmodel/wiki/prf-Synthesize:-how-to-edit-json-file
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/opt/mcr/v95//runtime/glnxa64:/opt/mcr/v95//bin/glnxa64:/opt/mcr/v95//sys/os/glnxa64:/opt/mcr/v95//sys/opengl/lib/glnxa64
Fatal Internal Error: std::exception: uint64_t foundation::core::system::linux::x86_64::getMaximumProcessorFrequencyImpl(): Numerical result out of range

real    0m11.802s
user    0m6.786s
sys     0m4.535s
<ERROR> [garikoitz/prfsynth]     An error occurred during execution of the Matlab executable. Exiting!
Docker command executed successfully. Output is in '/data/ds-prfsynth'.

I also tried the --platform-variable, but doesn't help:

docker run --rm -it \
    --platform linux/amd64 \
    -v "$script_dir/$json_file:/flywheel/v0/input/config.json" \
    -v "$basedir:/flywheel/v0/output" \
    garikoitz/prfsynth

[garikoitz/prfsynth]     See detailed usage here: https://github.com/vistalab/PRFmodel/wiki/prf-Synthesize:-how-to-edit-json-file
------------------------------------------
Setting up environment variables
---
LD_LIBRARY_PATH is .:/opt/mcr/v95//runtime/glnxa64:/opt/mcr/v95//bin/glnxa64:/opt/mcr/v95//sys/os/glnxa64:/opt/mcr/v95//sys/opengl/lib/glnxa64
Fatal Internal Error: std::exception: uint64_t foundation::core::system::linux::x86_64::getMaximumProcessorFrequencyImpl(): Numerical result out of range

real    0m8.321s
user    0m6.440s
sys     0m2.025s
<ERROR> [garikoitz/prfsynth]     An error occurred during execution of the Matlab executable. Exiting!
Docker command executed successfully. Output is in '/data/ds-prfsynth'.```

[garikoitz]

yeah, the ARM thing can be tricky. Matlab needs to be compiled with the same OS as the host (Linux), and the same version of the MCR installed in the host. I had no problem running on Intel Macs but I haven't tried in ARM Macs. We will check it at some point, it is good that you could use a Linux server for running it.

…

On Tue, Jan 28, 2025 at 4:52 PM Gilles de Hollander < ***@***.***> wrote: Hey, Would it be possible to compile the Matlab code that is needed to simulate PRF data on ARM64? Right now I cannot run the garikoitz/prfsynth-docker on my Macbook: docker run --rm -it \ -v "$script_dir/$json_file:/flywheel/v0/input/config.json" \ -v "$basedir:/flywheel/v0/output" \ garikoitz/prfsynth WARNING: The requested image's platform (linux/amd64) does not match the detected host platform (linux/arm64/v8) and no specific platform was requested [garikoitz/prfsynth] Initialized. [garikoitz/prfsynth] See detailed usage here: https://github.com/vistalab/PRFmodel/wiki/prf-Synthesize:-how-to-edit-json-file ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/opt/mcr/v95//runtime/glnxa64:/opt/mcr/v95//bin/glnxa64:/opt/mcr/v95//sys/os/glnxa64:/opt/mcr/v95//sys/opengl/lib/glnxa64 Fatal Internal Error: std::exception: uint64_t foundation::core::system::linux::x86_64::getMaximumProcessorFrequencyImpl(): Numerical result out of range real 0m11.802s user 0m6.786s sys 0m4.535s <ERROR> [garikoitz/prfsynth] An error occurred during execution of the Matlab executable. Exiting! Docker command executed successfully. Output is in '/data/ds-prfsynth'. I also tried the --platform-variable, but doesn't help: docker run --rm -it \ --platform linux/amd64 \ -v "$script_dir/$json_file:/flywheel/v0/input/config.json" \ -v "$basedir:/flywheel/v0/output" \ garikoitz/prfsynth [garikoitz/prfsynth] See detailed usage here: https://github.com/vistalab/PRFmodel/wiki/prf-Synthesize:-how-to-edit-json-file ------------------------------------------ Setting up environment variables --- LD_LIBRARY_PATH is .:/opt/mcr/v95//runtime/glnxa64:/opt/mcr/v95//bin/glnxa64:/opt/mcr/v95//sys/os/glnxa64:/opt/mcr/v95//sys/opengl/lib/glnxa64 Fatal Internal Error: std::exception: uint64_t foundation::core::system::linux::x86_64::getMaximumProcessorFrequencyImpl(): Numerical result out of range real 0m8.321s user 0m6.440s sys 0m2.025s <ERROR> [garikoitz/prfsynth] An error occurred during execution of the Matlab executable. Exiting! Docker command executed successfully. Output is in '/data/ds-prfsynth'.``` — Reply to this email directly, view it on GitHub <#96>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABCZAVZT7WCUMGM6QDQC55T2M6RSBAVCNFSM6AAAAABWAZWXKCVHI2DSMVQWIX3LMV43ASLTON2WKOZSHAYTMMBYGAYDIOA> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>