diff --git a/core/include/seqan/align/gap_anchor.h b/core/include/seqan/align/gap_anchor.h index 7e82f38d9b..76d5c89446 100644 --- a/core/include/seqan/align/gap_anchor.h +++ b/core/include/seqan/align/gap_anchor.h @@ -65,8 +65,8 @@ typedef Tag const SortGapPos; * @headerfile * @brief Stores the position of an alignment character in sequence-space and in gap-space. * - * @signature template - * struct GapAnchor; + * @signature template + * struct GapAnchor; * * @tparam TPos Type to store gapped/ungapped positions. * @@ -106,14 +106,14 @@ template struct GapAnchor { /*! - * @var VariableType GapAnchor::seqPos - * @brief Sequence character position in the ungapped sequence. + * @var TPos GapAnchor::seqPos + * @brief Sequence character position in the ungapped sequence (e.g. @link IntegerConcept @endlink). */ TPos seqPos; // sequence character position in the ungapped sequence /*! - * @var VariableType GapAnchor::gapPos - * @brief Sequence character position in the gapped sequence. + * @var TPos GapAnchor::gapPos + * @brief Sequence character position in the gapped sequence (e.g. @link IntegerConcept @endlink). */ TPos gapPos; // sequence character position in the gapped sequence diff --git a/core/include/seqan/align/gaps_base.h b/core/include/seqan/align/gaps_base.h index 4d17b78b4d..62ea74abf3 100644 --- a/core/include/seqan/align/gaps_base.h +++ b/core/include/seqan/align/gaps_base.h @@ -78,7 +78,7 @@ typedef Tag ArrayGaps; * @brief Store the gapped version of a sequence. * * @signature template - * class Gaps; + * class Gaps; * * @tparam TSequence The type of the underlying sequence. * @tparam TSpec Tag for specialization. diff --git a/core/include/seqan/stream/stream_gz_file.h b/core/include/seqan/stream/stream_gz_file.h index 83eb971739..f0501fafc7 100644 --- a/core/include/seqan/stream/stream_gz_file.h +++ b/core/include/seqan/stream/stream_gz_file.h @@ -55,6 +55,8 @@ inline void close(Stream & stream); /*! * @class GzFileStream + * @extends Stream + * @extends StreamConcept * @headerfile * @brief Allows to open gzip-compressed files. * @signature template <>