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train.py
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"""
Date: 2021/05/10
Author: worith
"""
import torch
import argparse
import os
import time
import pandas as pd
import numpy as np
import copy
from model.model import NetX2Y, NetH2Y
import torch.utils.data as Data
import matplotlib.pyplot as plt
from tensorboardX import SummaryWriter
from dataset.fracture_dataset import PDDataset
from config.config import global_config
from sklearn.model_selection import train_test_split
plt.rcParams['font.size'] = 18
plt.rcParams['font.sans-serif'] = 'Times New Roman'
def adjust_learning_rate(optimizer, epoch):
"""Sets the learning rate to the initial LR decayed by 10 every 150 epochs"""
lr = base_lr * (0.1 ** (epoch // 25))
for param_group in optimizer.param_groups:
param_group['lr'] = lr
parser = argparse.ArgumentParser(description='agent model of frature')
parser.add_argument('--trainer_name', default=global_config.getRaw('config', 'model_name'))
parser.add_argument('--gpu', type=int, default=[0], nargs='+', help='used gpu')
parser.add_argument('--h2y', action='store_true', help="Hidden to output")
parser.add_argument('--x2y', action='store_true', help="input to output")
parser.add_argument('--six_stages', action='store_true', help='2 stages data or 6 stages')
args = parser.parse_args()
# global config
data_path = global_config.getRaw('config', 'data_base_path')
stages = global_config.getRaw('config', 'stages')
runs_save_folder = os.path.join(global_config.getRaw('config', 'runs_save_folder'), stages)
model_save_folder = os.path.join(global_config.getRaw('config', 'model_save_folder'), stages)
best_h2y_model = global_config.getRaw('config', 'best_h2y_model')
if not os.path.exists(model_save_folder):
os.makedirs(model_save_folder)
# train config
epochs = int(global_config.getRaw('train', 'num_epochs'))
batch_size = int(global_config.getRaw('train', 'batch_size'))
base_lr = float(global_config.getRaw('train', 'lr'))
save_freq = int(global_config.getRaw('train', 'save_freq'))
random_seed = int(global_config.getRaw('train', 'random_seed'))
add_physical_info = int(global_config.getRaw('train', 'add_physical_info'))
noise = float(global_config.getRaw('train', 'is_noise'))
# best_h2y_model = best_h2y_model.replace('h2y', 'h2y_noise_%.4f' % noise)
writer = SummaryWriter(os.path.join(runs_save_folder), '%s' % args.trainer_name)
model_dir = os.path.join(model_save_folder, '%s/' % args.trainer_name)
np.random.seed(random_seed)
def main():
# load data
if args.six_stages:
file_path = os.path.join(data_path, '6_stages.csv')
else:
file_path = os.path.join(data_path, 'fracture_20201210.csv')
data = pd.read_csv(file_path)
data.dropna(axis=0, how='any', inplace=True)
if noise:
noise_data = np.array(data['Fracture Spacing'])
noise_data = noise_data + noise * \
np.std(noise_data) * np.random.randn(noise_data.shape[0])
data['Fracture Spacing'] = noise_data
data = data.apply(lambda x: (x - np.min(x)) / (np.max(x) - np.min(x)))
train_data, val_test_data = train_test_split(data, test_size=0.2, random_state=random_seed)
test_data, val_data = train_test_split(val_test_data, test_size=0.5, random_state=random_seed)
if args.six_stages:
train_dataset = PDDataset('6', train_data)
val_dataset = PDDataset('6', val_data)
test_dataset = PDDataset('6', test_data)
else:
train_dataset = PDDataset('2', train_data)
val_dataset = PDDataset('2', val_data)
test_dataset = PDDataset('2', test_data)
train_loader = Data.DataLoader(
dataset=train_dataset, # torch TensorDataset format
batch_size=batch_size, # mini batch size
shuffle=True,
num_workers=0,
)
val_loader = Data.DataLoader(
dataset=val_dataset, # torch TensorDataset format
batch_size=batch_size, # mini batch size
shuffle=True,
num_workers=0,
)
if args.six_stages:
net_h2y = NetH2Y(200, 200, 200, 200, len(train_dataset.hidden_feat), n_output=len(train_dataset.out_feat))
net_x2y = NetX2Y(20, 40, 20, 20, add_physical_info, n_feature=(len(train_dataset.in_feat) + len(train_dataset.hidden_feat)),
n_output=len(train_dataset.out_feat))
else:
net_h2y = NetH2Y(20, 40, 20, len(train_dataset.hidden_feat), n_output=len(train_dataset.out_feat))
net_x2y = NetX2Y(20, 40, 20, 20, add_physical_info, n_feature=len(train_dataset.in_feat),
n_output=len(train_dataset.out_feat))
loss_func = torch.nn.MSELoss()
if args.h2y:
optimizer_h2y = torch.optim.Adam(net_h2y.parameters(), lr=base_lr)
train_writer_h2y = SummaryWriter(os.path.join(runs_save_folder, args.trainer_name + '_h2y'))
best_h2y_error = np.inf
best_h2y_model = copy.deepcopy(net_h2y.state_dict())
for epoch in range(epochs):
adjust_learning_rate(optimizer_h2y, epoch)
train(net_h2y, net_x2y, optimizer_h2y, loss_func, train_writer_h2y, train_loader, add_physical_info,
epoch, stage=1)
h2y_error = val(net_h2y, net_x2y, loss_func, train_writer_h2y, val_loader, add_physical_info,
epoch, stage=1)
if h2y_error < best_h2y_error:
best_h2y_error = h2y_error
best_h2y_model = copy.deepcopy(net_h2y.state_dict())
torch.save(best_h2y_model, model_save_folder + "/%s_best_model_h2y.pth" % (args.trainer_name))
if args.x2y:
if add_physical_info:
train_writer_x2y = SummaryWriter(os.path.join(runs_save_folder, args.trainer_name + '_x2y_added_noise_%.4f' % noise))
save_x2y_model_path = model_save_folder + "/%s_best_model_x2y_added_noise_%.4f.pth" % (args.trainer_name, noise)
else:
train_writer_x2y = SummaryWriter(os.path.join(runs_save_folder, args.trainer_name + '_x2y_noise_%.4f' % noise))
save_x2y_model_path = model_save_folder + "/%s_best_model_x2y_noise_%.4f.pth" % (args.trainer_name, noise)
optimizer_x2y = torch.optim.Adam(net_x2y.parameters(), lr=base_lr)
best_x2y_error = np.inf
best_x2y_model = copy.deepcopy(net_x2y.state_dict())
for epoch in range(epochs):
adjust_learning_rate(optimizer_x2y, epoch)
train(net_h2y, net_x2y, optimizer_x2y, loss_func, train_writer_x2y, train_loader, add_physical_info,
epoch, stage=2)
x2y_error = val(net_h2y, net_x2y, loss_func, train_writer_x2y, val_loader, add_physical_info,
epoch, stage=2)
if x2y_error < best_x2y_error:
best_x2y_error = x2y_error
best_x2y_model = copy.deepcopy(net_x2y.state_dict())
torch.save(best_x2y_model, save_x2y_model_path)
def train(model_1, model_2, optimizer, loss_func, train_writer, loader, add_physical_info, epoch, stage):
model_1.train()
model_2.train()
losses = []
pred, target = [], []
epoch_start_time = time.time()
for step, (x, h, y) in enumerate(loader): # 每一步 loader 释放一小批数据用来学习
start_time = time.time()
if stage == 1:
prediction = model_1(h)
loss = loss_func(prediction, y)
elif stage == 2:
if add_physical_info:
model_1.load_state_dict(torch.load(model_save_folder + "/%s" % best_h2y_model))
model_1.eval()
_, physical_info = model_1(h)
model_2.add_physical_info(physical_info)
prediction = model_2(x)
else:
prediction = model_2(x)
loss = loss_func(prediction, y)
else:
print("please input the correct stage")
return
optimizer.zero_grad()
loss.backward()
optimizer.step()
losses.append(loss.data.item())
if step == 0:
pred = prediction.detach().numpy()
target = y.detach().numpy()
else:
pred = np.concatenate((np.array(pred), prediction.detach().numpy()), 0)
target = np.concatenate((np.array(target), y.detach().numpy()), 0)
print(
f"Stage: {stage}\t Epoch: {epoch} \t Batch_num: {step} \t Loss={loss.data.cpu():.4} \t "
f"Time={time.time() - start_time:.4}")
error = np.linalg.norm(target - pred, 2) / np.linalg.norm(target, 2)
print(f"Train \t Epoch={epoch} \t AVG_Loss={np.mean(losses):.4} \t Time={time.time() - epoch_start_time:.4} \t"
f"l2_error={error:.4}")
train_writer.add_scalar('Loss/train', np.mean(losses), epoch)
train_writer.add_scalar('l2_error/train', error, epoch)
train_writer.flush()
# return np.mean(losses)
def val(model_1, model_2, loss_func, train_writer, loader, add_physical_info, epoch, stage):
model_1.eval()
model_2.eval()
with torch.no_grad():
losses = []
pred, target = [], []
epoch_start_time = time.time()
for step, (x, h, y) in enumerate(loader): # 每一步 loader 释放一小批数据用来学习
start_time = time.time()
if stage == 1:
prediction, _ = model_1(h)
loss = loss_func(prediction, y)
elif stage == 2:
if add_physical_info:
model_1.load_state_dict(torch.load(model_save_folder + "/%s" % best_h2y_model))
_, physical_info = model_1(h)
model_2.add_physical_info(physical_info)
prediction = model_2(x)
else:
prediction = model_2(x)
loss = loss_func(prediction, y)
else:
print("please input the correct stage")
return
losses.append(loss.data.item())
if step == 0:
pred = prediction.detach().numpy()
target = y.detach().numpy()
else:
pred = np.concatenate((np.array(pred), prediction.detach().numpy()), 0)
target = np.concatenate((np.array(target), y.detach().numpy()), 0)
# print(
# f"Stage: {stage}\t Epoch: {epoch} \t Batch_num: {step} \t Loss={loss.data.cpu():.4} \t "
# f"Time={time.time() - start_time:.4}")
error = np.linalg.norm(target - pred, 2) / np.linalg.norm(target, 2)
print(f"Val \t Epoch={epoch} \t AVG_Loss={np.mean(losses):.4} \t Time={time.time() - epoch_start_time:.4} \t"
f" l2_error={error:.4}")
train_writer.add_scalar('Loss/val', np.mean(losses), epoch)
train_writer.add_scalar('l2_error/val', error, epoch)
train_writer.flush()
return error
if __name__ == '__main__':
main()