-
First assumption was that parameter space is
$\Theta = [\kappa, d_{\tau} ]$ with fixed preferred direction. -
Next, added the location dependancy of preferred direction, where at each location:
- Chemical gradient equation, assuming source points, diffusing radially symmetric at distance r from each source:
with asympthotic solution
- The over all chemical gradient at each point is the net effect of closest point sources.
- New parameter space:
$\Theta = [\kappa, d_{\tau}, Q, D, \lambda, (x_i,y_i)]$ where$i = 1, \dots, B$ are the closest B point sources. - First, assuming 1 single source point fixed in domain.
- For cases with cancer cells, we don't have any physical insights into some parameters such as Q, D, lambda. So, it makes more sense to use a wider prior for these values and with some help from SNPE, gradually converge to the actual values for these parameters.
- For the chemical field, let's just assume Q = Q / D, lambda = lambda / D.