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Make check for empty bframe more robust #54

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Merged
keviny2 merged 1 commit into from
May 15, 2025
Merged

Make check for empty bframe more robust #54

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4 changes: 2 additions & 2 deletions CHANGELOG.md
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Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
# Changelog

## Version 0.0.11
- BUGFIX: `to_anndata()` only populates `obsm` with spatial coordinates if the original `SpatialExperiment` has spatial coordinates (PR #53)
## Version 0.0.11-0.0.12
- BUGFIX: `to_anndata()` only populates `obsm` with spatial coordinates if the original `SpatialExperiment` has spatial coordinates (PR #53, #54)


## Version 0.0.10
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2 changes: 1 addition & 1 deletion src/spatialexperiment/spatialexperiment.py
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Expand Up @@ -1051,7 +1051,7 @@ def to_anndata(self, include_alternative_experiments: bool = False) -> "anndata.
"tissue_hires_scalef": row["scale_factor"]
} # default to `tissue_hires_scalef` for now

if len(self.spatial_coordinates) > 0:
if self.spatial_coords_names:
coords_by_axis = [self.spatial_coordinates[axis] for axis in self.spatial_coords_names]
obj.obsm["spatial"] = np.column_stack(coords_by_axis)

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