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BirolLab / btllib Public

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Fork 7
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Expand Indexlr to use AAHash#109

Open

jwcodee wants to merge 12 commits intomasterBirolLab/btllib:masterfrom

indexlr_aahashBirolLab/btllib:indexlr_aahashCopy head branch name to clipboard

Conversation Commits12 (12)Checks Files changed

Open

Expand Indexlr to use AAHash#109
jwcodee wants to merge 12 commits intomasterfrom
indexlr_aahash

Commits

Commits on Jul 16, 2023

aahash: add forward() function to have same member function as nthash
jwcodee
committed
indexlr.hpp: make indexlr a class template to work with NtHash and AAHash
jwcodee
committed
indexlr: update test
jwcodee
committed
indexlr: update wrappers
jwcodee
committed
indexlr.cpp: WIP for incorprating hashing amino acid seq
jwcodee
committed

Commits on Jul 19, 2023

indexlr.hpp: move record and minimizer out of class template Indexlr<T>
jwcodee
committed
update indexlr unit test
jwcodee
committed
indexlr.cpp: use std::visit to access indexlr variant to call read()
jwcodee
committed
indexlr: update wrappers
jwcodee
committed
indexlr: compile wrappers with swig 4.1.1
jwcodee
committed
indexlr.cpp: update record during while loop
jwcodee
committed
indexlr: update wrappers
jwcodee
committed

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