CalCOFI
- 13 followers
- Scripps Institution of Oceanography | San Diego, CA, USA
- https://calcofi.io
- @calcofi
- esatterthwaite@ucsd.edu
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eDNA-protocols
eDNA-protocols PublicProtocols for sampling, processing, and analysis of eDNA collected on CalCOFI cruises. All protocols are formatted according to guidelines from Better Biomolecular Ocean Practices (BeBOP) using Min…
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- eDNA-protocols Public
Protocols for sampling, processing, and analysis of eDNA collected on CalCOFI cruises. All protocols are formatted according to guidelines from Better Biomolecular Ocean Practices (BeBOP) using Minimum Information about an Omics Protocol (MIOP) terms.
CalCOFI/eDNA-protocols’s past year of commit activity - Archived-eDNA-Sampling Public
This protocol describes the methods used to sample preserved eDNA from archived biorepositories, such as ethanol-preserved bongo net tow samples.
CalCOFI/Archived-eDNA-Sampling’s past year of commit activity - MOSAIC_Underway_Sampling Public
Protocol for collecting eDNA samples from a ship's underway water system.
CalCOFI/MOSAIC_Underway_Sampling’s past year of commit activity - Membrane-phenol-DNA-extraction Public
This protocol describes the extraction of DNA from 47 mm filters stored without buffer using phenol:chloroform and an isopropanol precipitation.
CalCOFI/Membrane-phenol-DNA-extraction’s past year of commit activity - eDNA_sampling_RREAS Public
Sampling protocol based on the method developed for the NOAA Rockfish Recruitment and Ecosystem Assessment Survey (RREAS)
CalCOFI/eDNA_sampling_RREAS’s past year of commit activity - docs Public
Help documentation for the constellation of webenized and workflow products (in bookdown)
CalCOFI/docs’s past year of commit activity - calcofi4r Public
R package of data wrangling and visualization functions for working with CalCOFI data
CalCOFI/calcofi4r’s past year of commit activity
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