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fix typo in useSeasonalUStarThresholds #71

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Merged
bgctw merged 1 commit into from
Sep 3, 2025
Merged

fix typo in useSeasonalUStarThresholds #71

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2 changes: 1 addition & 1 deletion NAMESPACE
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Original file line number Diff line number Diff line change
Expand Up @@ -114,7 +114,7 @@ export(sEddyProc_sTKFluxPartition)
export(sEddyProc_sTKFluxPartitionUStarScens)
export(sEddyProc_update_ustarthreshold_columns)
export(sEddyProc_useAnnualUStarThresholds)
export(sEddyProc_useSeaonsalUStarThresholds)
export(sEddyProc_useSeasonalUStarThresholds)
export(usControlUstarEst)
export(usControlUstarSubsetting)
export(usCreateSeasonFactorMonth)
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8 changes: 5 additions & 3 deletions R/aEddy.R
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Expand Up @@ -286,7 +286,7 @@ sEddyProc_sSetUstarScenarios <- function(
sEddyProc$methods(sSetUstarScenarios = sEddyProc_sSetUstarScenarios)

#' @export
sEddyProc_useSeaonsalUStarThresholds <- function(
sEddyProc_useSeasonalUStarThresholds <- function(
### use seasonal estimates of uStar thresholds
) {
##seealso<< \code{\link{sEddyProc_sSetUstarScenarios}},
Expand All @@ -295,14 +295,16 @@ sEddyProc_useSeaonsalUStarThresholds <- function(
uStarMap <- usGetSeasonalSeasonUStarMap(uStarThAgg)
.self$sSetUstarScenarios(uStarMap)
}
sEddyProc$methods(useSeaonsalUStarThresholds = sEddyProc_useSeaonsalUStarThresholds)
sEddyProc$methods(useSeasonalUStarThresholds = sEddyProc_useSeasonalUStarThresholds)
# backward compatibiity to former typo
sEddyProc$methods(useSeaonsalUStarThresholds = sEddyProc_useSeasonalUStarThresholds)

#' @export
sEddyProc_useAnnualUStarThresholds <- function(
### use seasonal estimates of uStar thresholds
) {
##seealso<< \code{\link{sEddyProc_sSetUstarScenarios}},
## \code{\link{sEddyProc_useSeaonsalUStarThresholds}}
## \code{\link{sEddyProc_useSeasonalUStarThresholds}}
uStarThAgg <- .self$sGetEstimatedUstarThresholdDistribution()
uStarMap <- usGetAnnualSeasonUStarMap(uStarThAgg)
.self$sSetUstarScenarios(uStarMap)
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2 changes: 1 addition & 1 deletion man/sEddyProc_useAnnualUStarThresholds.Rd
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Expand Up @@ -11,5 +11,5 @@


\seealso{\code{\link{sEddyProc_sSetUstarScenarios}},
\code{\link{sEddyProc_useSeaonsalUStarThresholds}}}
\code{\link{sEddyProc_useSeasonalUStarThresholds}}}

8 changes: 4 additions & 4 deletions man/sEddyProc_useSeaonsalUStarThresholds.Rd → man/sEddyProc_useSeasonalUStarThresholds.Rd
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@@ -1,8 +1,8 @@
\name{sEddyProc_useSeaonsalUStarThresholds}
\alias{sEddyProc_useSeaonsalUStarThresholds}
\title{sEddyProc useSeaonsalUStarThresholds}
\name{sEddyProc_useSeasonalUStarThresholds}
\alias{sEddyProc_useSeasonalUStarThresholds}
\title{sEddyProc useSeasonalUStarThresholds}
\description{use seasonal estimates of uStar thresholds}
\usage{sEddyProc_useSeaonsalUStarThresholds()}
\usage{sEddyProc_useSeasonalUStarThresholds()}



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10 changes: 5 additions & 5 deletions vignettes/DEGebExample.Rmd
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Expand Up @@ -103,7 +103,7 @@ abline( v = seasonStartsDate$DateTime)
The user-specific seasoning is provided to the gap-filling by the argument `seasonFactor`.
```{r DEGeb_estUStar1b, cache = TRUE}
(uStarTh <- EProc$sEstUstarThold(seasonFactor = seasonFactor))
#EProc$useSeaonsalUStarThresholds()
#EProc$useSeasonalUStarThresholds()
# estimation can be inspected by plotting the saturation of NEE with UStar
# for the temperatures of one season
#EProc$sPlotNEEVersusUStarForSeason( levels(uStarTh$season)[2] )
Expand All @@ -116,11 +116,11 @@ the mean across the years.
By default the gap-filling uses annually aggregated estimates of uStar-Threshold.
This usually works for sites with continuous vegetation cover.
For the crop-site of this example, we will use a different threshold for each of
the defined seasons, by calling `sEddyProc_useSeaonsalUStarThresholds`
the defined seasons, by calling `sEddyProc_useSeasonalUStarThresholds`
before gapfilling.

```{r DEGeb_estUStar1c}
EProc$useSeaonsalUStarThresholds()
EProc$useSeasonalUStarThresholds()
EProc$sGetUstarScenarios()
```

Expand Down Expand Up @@ -154,7 +154,7 @@ EProc$sEstimateUstarScenarios(
# EProc$sGetEstimatedUstarThresholdDistribution()
#))
#EProc$sSetUstarScenarios(uStarScens)
EProc$useSeaonsalUStarThresholds()
EProc$useSeasonalUStarThresholds()
EProc$sGetUstarScenarios()
```

Expand Down Expand Up @@ -205,7 +205,7 @@ resUStar <- EProc$sEstUstarThold(
, seasonFactor = seasonFactor
)
#(uStarThCP <- usGetSeasonalSeasonUStarMap(resUStar))
EProc$useSeaonsalUStarThresholds()
EProc$useSeasonalUStarThresholds()
EProc$sGetUstarScenarios()
```

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10 changes: 5 additions & 5 deletions vignettes/DEGebExample.md
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Expand Up @@ -93,7 +93,7 @@ argument `seasonFactor`.
## 12 season 2006 2006120 0.06966667
## 13 season 2006 2006305 0.25094444

#EProc$useSeaonsalUStarThresholds()
#EProc$useSeasonalUStarThresholds()
# estimation can be inspected by plotting the saturation of NEE with UStar
# for the temperatures of one season
#EProc$sPlotNEEVersusUStarForSeason( levels(uStarTh$season)[2] )
Expand All @@ -106,9 +106,9 @@ By default the gap-filling uses annually aggregated estimates of
uStar-Threshold. This usually works for sites with continuous vegetation
cover. For the crop-site of this example, we will use a different
threshold for each of the defined seasons, by calling
`sEddyProc_useSeaonsalUStarThresholds` before gapfilling.
`sEddyProc_useSeasonalUStarThresholds` before gapfilling.

EProc$useSeaonsalUStarThresholds()
EProc$useSeasonalUStarThresholds()
EProc$sGetUstarScenarios()

## season uStar
Expand Down Expand Up @@ -148,7 +148,7 @@ uStar Threshold.
# EProc$sGetEstimatedUstarThresholdDistribution()
#))
#EProc$sSetUstarScenarios(uStarScens)
EProc$useSeaonsalUStarThresholds()
EProc$useSeasonalUStarThresholds()
EProc$sGetUstarScenarios()

## season uStar U10 U90
Expand Down Expand Up @@ -206,7 +206,7 @@ as Gap.
, seasonFactor = seasonFactor
)
#(uStarThCP <- usGetSeasonalSeasonUStarMap(resUStar))
EProc$useSeaonsalUStarThresholds()
EProc$useSeasonalUStarThresholds()
EProc$sGetUstarScenarios()

## season uStar
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4 changes: 2 additions & 2 deletions vignettes/uStarCases.Rmd
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Expand Up @@ -152,12 +152,12 @@ In conjunction with method `usGetSeasonalSeasonUStarMap` and
`sEddyProc_sSetUstarScenarios` this can be used
to set seasonally different u* threshold.
However, this common case supported by method
`sEddyProc_useSeaonsalUStarThresholds`.
`sEddyProc_useSeasonalUStarThresholds`.

```{r uStarScenSetSeasonal}
#EProc$sSetUstarScenarios(
# usGetSeasonalSeasonUStarMap(uStarThAgg)[,-2])
EProc$useSeaonsalUStarThresholds()
EProc$useSeasonalUStarThresholds()
# inspect the changed thresholds to be used
EProc$sGetUstarScenarios()
```
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4 changes: 2 additions & 2 deletions vignettes/uStarCases.md
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Expand Up @@ -149,11 +149,11 @@ estimates for different aggregation levels, use method
In conjunction with method `usGetSeasonalSeasonUStarMap` and
`sEddyProc_sSetUstarScenarios` this can be used to set seasonally
different u\* threshold. However, this common case supported by method
`sEddyProc_useSeaonsalUStarThresholds`.
`sEddyProc_useSeasonalUStarThresholds`.

#EProc$sSetUstarScenarios(
# usGetSeasonalSeasonUStarMap(uStarThAgg)[,-2])
EProc$useSeaonsalUStarThresholds()
EProc$useSeasonalUStarThresholds()
# inspect the changed thresholds to be used
EProc$sGetUstarScenarios()

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