V8.0.1 #21
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V8.0.1 #21
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add slurm files for use on slurm enabled HPC Changes to be committed: new file: slurm/acc2taxid_check.sh new file: slurm/archaea_index.sh new file: slurm/archaea_nt_filter.sh new file: slurm/bacteria_index.sh new file: slurm/bacteria_nt_filter.sh new file: slurm/child_blacklist.sh new file: slurm/count_stats.sh new file: slurm/deadDB.sh new file: slurm/nt_filter.sh new file: slurm/nucleotideDB.sh new file: slurm/parent_blacklist.sh new file: slurm/protDB.sh new file: slurm/sort_u.sh new file: slurm/viruses_index.sh new file: slurm/viruses_nt_filter.sh new file: slurm/wc_blacklist.sh new file: slurm/whitelist.sh
Changes to be committed: modified: README.md deleted: child_taxid_blacklist.py deleted: docs/Makefile renamed: README_slim.md -> docs/README_slim.md renamed: Release_Notes_v7.0.md -> docs/Release_Notes_v7.0.md new file: docs/Release_Notes_v8.0.md renamed: Release_note_May31_2017 -> docs/Release_note_May31_2017 deleted: docs/build/ new file: docs/cli_protocol.md deleted: docs/make.bat renamed: notes.txt -> docs/notes_v7.txt new file: docs/notes_v8.txt new file: docs/slurm_protocol.md deleted: docs/source/ new file: docs/subset_protocol.md deleted: filter_nt.py deleted: modules.rst deleted: parent_taxid_blacklist.py renamed: ac2taxid_check.py -> python/ac2taxid_check.py renamed: blackstats.py -> python/blackstats.py new file: python/child_taxid_blacklist.py renamed: compare-old-new-blacklist.py -> python/compare-old-new-blacklist.py new file: python/filter_nt.py renamed: filter_slim.py -> python/filter_slim.py renamed: read_up_detail.py -> python/read_up_detail.py new file: python/taxid_filterlist.py deleted: results.json renamed: eutils_efetch.sh -> shell/eutils_efetch.sh modified: shell/nucleotide-db.sh renamed: upData.sh -> shell/upData.sh
Changes to be committed: modified: docs/Release_Notes_v8.0.md modified: docs/notes_v8.txt
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