Packages update

[JairMathAI]

The project is now compatible with the latest versions of its dependencies. PyTorch has been updated to version 2.0.8, but the project requires torch >= 2.6.0. This is because the latest version of MONAI (1.5.0) only supports up to this PyTorch version. During installation, using a newer version of PyTorch causes a conflict that breaks the installation.

After a successful installation, I manually upgraded PyTorch to the latest version. This resulted in a warning regarding MONAI support, but the project continues to run without issues. Lightning and BioIO are also now running on their latest versions.

These updates should prevent dependency conflicts for our collaborators, even when they install the latest CUDA drivers.

[codecov-commenter]

Codecov Report

❌ Patch coverage is 0% with 506 lines in your changes missing coverage. Please review.
✅ Project coverage is 3.44%. Comparing base (ba85ae2) to head (e7f2002).
⚠️ Report is 15 commits behind head on main.

Files with missing lines	Patch %	Lines
mmv_im2im/utils/utils.py	0.00%	215 Missing ⚠️
mmv_im2im/utils/fractal_layers.py	0.00%	89 Missing ⚠️
mmv_im2im/utils/topological_loss.py	0.00%	80 Missing ⚠️
mmv_im2im/utils/elbo_loss.py	0.00%	74 Missing ⚠️
mmv_im2im/utils/connectivity_loss.py	0.00%	34 Missing ⚠️
mmv_im2im/proj_tester.py	0.00%	11 Missing ⚠️
mmv_im2im/proj_trainer.py	0.00%	3 Missing ⚠️

Additional details and impacted files

@@           Coverage Diff            @@
##            main    #109      +/-   ##
========================================
- Coverage   4.40%   3.44%   -0.97%     
========================================
  Files         36      41       +5     
  Lines       2815    3513     +698     
  Branches       0     489     +489     
========================================
- Hits         124     121       -3     
- Misses      2691    3392     +701     

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