Skip to content

Conversation

@shilpigoeldev
Copy link
Contributor

What?

I have added a new importer for Leeds colorectal new version of files.

How?

By updating importer script and adding new handler.

Testing?

QA counts have been signed off and test added.

Anything Else?

N/A

@shilpigoeldev shilpigoeldev requested a review from NImeson December 5, 2025 14:56
Copy link
Contributor

@ollietulloch ollietulloch left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thanks @shilpigoeldev, a few initial comments added

def populate_raw_field_variables(record)
@report = record.raw_fields['report']
@moltestingtype = record.raw_fields['moleculartestingtype']
@value1 = record.raw_fields['proteinimpact']
Copy link
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Could these @value.. instance variables be given more meaningful names please?

Copy link
Contributor Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Hi @ollietulloch ,These variable names are what we are receiving in the file , so are aligned with the rules designed by Fiona and hence I used same names.

Copy link
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thanks @shilpigoeldev, I can see why you stuck with those names, they just seem a little meaningless wen review code without that context

Copy link
Collaborator

@NImeson NImeson left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Looks good, logic matches rules for FS and targeted tests. I don't think failing tests are related to these changes?

@shilpigoeldev shilpigoeldev merged commit b9d50f4 into develop Dec 9, 2025
7 of 11 checks passed
@shilpigoeldev shilpigoeldev deleted the feature/Leeds_CRC_new branch December 9, 2025 17:51
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

3 participants