MATLAB script for analysis of single cell live imaging video recordings in vivo. For use with the Leica SP5 or fluorescent microscopes with similar capabilities. Featured in the following publication:
Koechlein, C., Harris, J., Lee, T. et al. High-resolution imaging and computational analysis of haematopoietic cell dynamics in vivo. Nat Commun 7, 12169 (2016). https://doi.org/10.1038/ncomms12169
Many thanks to Dr. Markus Covert and Dr. Timothy Lee at Stanford for writing this custom program.