Update AbstractConverter.java

pom.xml

@@ -453,7 +453,7 @@
 		<dependency>
 			<groupId>net.sourceforge.owlapi</groupId>
 			<artifactId>owlapi-distribution</artifactId>
-			<version>5.1.1</version>
+			<version>5.5.1</version>
 		</dependency>
 
 		<dependency>

src/main/java/de/uni_stuttgart/vis/vowl/owl2vowl/converter/AbstractConverter.java

@@ -343,6 +343,7 @@ private void setCorrectType(Collection<AbstractEntity> entities) {
 	}
 
 	private void postParsing(OWLOntology loadedOntology, VowlData vowlData, OWLOntologyManager manager) {
+		vowlData.fixProperties();
 		setCorrectType(vowlData.getEntityMap().values());
 		parseAnnotations(vowlData, manager);
 		fillDomainRanges(vowlData);

src/main/java/de/uni_stuttgart/vis/vowl/owl2vowl/export/JsonGeneratorVisitorImpl.java

@@ -90,6 +90,7 @@ public void visit(VowlThing vowlThing) {
 		Map<String, Object> attributes = new HashMap<>();
 
 		addCommonFields(vowlThing, object, attributes);
+		attributes.remove("baseIri");
 		attributes.put("iri", VowlThing.GENERIC_THING_IRI.toString());
 
 		_class.add(object);
@@ -171,14 +172,17 @@ public void visit(VowlDatatype vowlDatatype) {
 		AbstractDatatype reference = vowlData.getDatatypeForIri(((DatatypeReference) vowlDatatype).getReferencedIri());
 		Map<String, Object> object = new HashMap<>();
 		Map<String, Object> attributes = new HashMap<>();
+		String iri = reference.getIri().toString();
 
 		object.put("id", vowlData.getIdForEntity(vowlDatatype));
 		object.put("type", reference.getType());
 
 		attributes.put("id", vowlData.getIdForEntity(vowlDatatype));
 		attributes.put("label", getLabelsFromAnnotations(reference.getAnnotations().getLabels()));
-		attributes.put("iri", reference.getIri().toString());
-		attributes.put("baseIri", reference.getBaseIri().toString());
+		attributes.put("iri", iri);
+
+		if(!iri.equals(VowlLiteral.LITERAL_IRI))
+			attributes.put("baseIri", reference.getBaseIri().toString());
 
 		_class.add(object);
 		classAttribute.add(attributes);

src/main/java/de/uni_stuttgart/vis/vowl/owl2vowl/export/types/JsonGenerator.java

@@ -20,6 +20,7 @@
 
 import java.util.*;
 import java.util.stream.Collectors;
+import java.util.stream.Stream;
 
 /**
  *
@@ -72,6 +73,8 @@ public void export(Exporter exporter) throws Exception {
 	}
 
 	protected void processHeader(VowlData vowlData) {
+		Set<String> ignoreOther = Stream.of("title", "versionInfo", "creator")
+		         .collect(Collectors.toCollection(HashSet::new));
 		OntologyInformation ontologyInformation = vowlData.getOntologyInformation();
 		header.put("languages", vowlData.getLanguages());
 		header.put("baseIris", vowlData.getBaseIris().stream().map(IRI::toString).collect(Collectors.toSet()));
@@ -83,14 +86,17 @@ protected void processHeader(VowlData vowlData) {
 		header.put("description", JsonGeneratorVisitorImpl.getLabelsFromAnnotations(ontologyInformation.getAnnotations().getDescription()));
 		header.put("labels", JsonGeneratorVisitorImpl.getLabelsFromAnnotations(ontologyInformation.getAnnotations().getLabels()));
 		header.put("comments", JsonGeneratorVisitorImpl.getLabelsFromAnnotations(ontologyInformation.getAnnotations().getComments()));
-		header.put("other", ontologyInformation.getAnnotations().getIdentifierToAnnotation());
+		header.put("other", ontologyInformation.getAnnotations().getIdentifierToAnnotation().entrySet().stream()
+		        .filter(x -> !ignoreOther.contains(x.getKey()))
+		        .collect(Collectors.toMap(Map.Entry::getKey, Map.Entry::getValue)));
 
 		Map<String, String> map = vowlData.getPrefixMap();
 		// adding prefix list to that thing;
 	    for (Map.Entry<String,String> entry : map.entrySet()) {
-	    	  String pr=entry.getKey();
-	            pr= pr.substring(0, pr.length() - 1);
-            prefixList.put(pr,entry.getValue());
+	    	String pr=entry.getKey();
+	        pr= pr.substring(0, pr.length() - 1);
+	        if(!pr.isEmpty())
+            		prefixList.put(pr,entry.getValue());
 	    }
 	}
 

src/main/java/de/uni_stuttgart/vis/vowl/owl2vowl/model/data/VowlData.java

@@ -365,6 +365,37 @@ public IRI generate() {
 			return IRI.create(iriPrefix + generations++);
 		}
 	}
+
+	/**
+	 * owlapi creates both ObjectProperty and DatatypeProperty from Properties
+     	 * with only type DatatypeProperty and InverseFunctionalProperty.
+     	 * The resulting file is different depending on the type that is 
+	 * created first (not deterministic).
+	 * Check if an ObjectProperty has no range and if a DatatypeProperty with the same iri
+   	 * exists, reinsert it to force it into the EntityMap.
+	 */
+	public void fixProperties() {
+		Iterator<Entry<IRI, VowlObjectProperty>> it = objectPropertyMap.entrySet().iterator();
+		while (it.hasNext()) {
+			Entry<IRI, VowlObjectProperty> pair = it.next();
+			VowlObjectProperty P = pair.getValue();
+			Set<IRI> R = P.getRanges();
+			VowlDatatypeProperty D = null;
+			if(R.size() == 0) {
+				try {
+					D = getDatatypePropertyForIri(pair.getKey());
+					if(D != null) {
+						for(IRI domain : P.getDomains())
+							D.addDomain(domain);
+						addDatatypeProperty(D);
+						it.remove();
+					}
+				} catch (Exception e) {
+
+				}
+			}
+		}
+	}
 }
 
 class AllEntityMap<K, V extends AbstractEntity> extends HashMap<K, V> {

src/main/java/de/uni_stuttgart/vis/vowl/owl2vowl/parser/vowl/AnnotationParser.java

@@ -4,6 +4,7 @@
 import de.uni_stuttgart.vis.vowl.owl2vowl.model.AbstractVowlObject;
 import de.uni_stuttgart.vis.vowl.owl2vowl.model.annotation.Annotation;
 import de.uni_stuttgart.vis.vowl.owl2vowl.model.data.VowlData;
+import de.uni_stuttgart.vis.vowl.owl2vowl.model.entities.nodes.datatypes.VowlLiteral;
 import de.uni_stuttgart.vis.vowl.owl2vowl.parser.helper.IriFormatText;
 import org.semanticweb.owlapi.model.OWLOntologyManager;
 
@@ -30,9 +31,12 @@ public void parse(AbstractVowlObject vowlObject) {
 	protected void parseForEntity(AbstractVowlObject entity) {
 		entity.accept(new AnnotationVisitor(vowlData, manager));
 
-		String iriLabel = IriFormatText.cutQuote(IriFormatText.extractNameFromIRI(entity.getIri().toString()));
-		Annotation iriAnnotationLabel = new Annotation("label", iriLabel);
-		iriAnnotationLabel.setLanguage(Vowl_Lang.LANG_DEFAULT);
-		entity.getAnnotations().addLabel(iriAnnotationLabel);
+		String iri = entity.getIri().toString();
+		if(!iri.equals(VowlLiteral.LITERAL_IRI)) {
+			String iriLabel = IriFormatText.cutQuote(IriFormatText.extractNameFromIRI(iri));
+			Annotation iriAnnotationLabel = new Annotation("label", iriLabel);
+			iriAnnotationLabel.setLanguage(Vowl_Lang.LANG_DEFAULT);
+			entity.getAnnotations().addLabel(iriAnnotationLabel);
+		}
 	}
 }

src/main/java/de/uni_stuttgart/vis/vowl/owl2vowl/parser/vowl/property/DomainRangeFiller.java

@@ -149,7 +149,7 @@ public void visit(TypeOfProperty typeOfProperty) {
 
 	private void classBehaviour(AbstractProperty property) {
 		if (property.getDomains().isEmpty() && property.getRanges().isEmpty()) {
-			if (!property.getReferencedIris().isEmpty()) {
+			if (!property.getReferencedIris().isEmpty() && property.getInverse() == null) {
 				property.setExportToJson(false);
 				return;
 			}

src/main/java/de/uni_stuttgart/vis/vowl/owl2vowl/parser/vowl/property/ObjectPropertyVisitor.java

@@ -113,7 +113,9 @@ public void visit(OWLInverseObjectPropertiesAxiom axiom) {
 		OWLObjectProperty baseProperty = secondProperty.asOWLObjectProperty();
 
 		AbstractProperty inverseVowlProp = vowlData.getPropertyForIri(inverseProperty.getIRI());
+		AbstractProperty baseVowlProp = vowlData.getPropertyForIri(baseProperty.getIRI());
 		inverseVowlProp.addInverse(baseProperty.getIRI());
+		baseVowlProp.addInverse(inverseProperty.getIRI());
 	}
 
 	@Override