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Releases: apcamargo/tspex

0.6.2

01 Jun 22:43

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  • Fixed a bug in the entropy function that raised a ValueError.

0.6.1

19 Dec 18:33

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  • Add support for expression matrix with , as thousand separators.

0.6.0

30 Nov 18:19

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  • Add support for Excel input files.

0.5.0

02 Jun 17:44
836c677

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  • TSI is now an individualized scoring metric. This change was made to reflect the original description of this metric in Julien, Philippe, et al. (2012).
  • In the tutorial, genes that are not expressed in any of the five selected tissues were removed from the analysis, improving the visualization of the results.

0.3.1

08 Apr 02:08

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  • Corrected typos in the docstrings.
  • Removed a unused variable from the spm function.
  • Raise warnings if the input DataFrame contains non-numerical columns or if there are duplicated gene names in the index.

0.3.0

24 Mar 17:09

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  • Added the sort_genes argument to the plot_heatmap method.

0.2.0

21 Mar 01:56
3761382

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  • Changed the name of the tspex_plot method to plot_histogram.
  • Use the constrained_layout argument in the plot_histogram method.
  • Added the plot_heatmap method.
  • Raise an error in case the user tries to create a TissueSpecificity object with a matrix containing negative values.
  • Deprecated the to_file method in favor of using the native pandas methods.

0.1.1

17 Mar 04:46

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tspex initial release.