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1. PFP_baselines PFP_baselines Public

   Alignment-based methods for Protein Function Prediction in the form of Gene Ontology (GO) terms

   Jupyter Notebook

2. KGene2Pheno KGene2Pheno Public

   Knowledge graph completion on biological data

   Jupyter Notebook 1 2

3. entity-norm entity-norm Public

   Comparative analysis of NLP neural methods for the entity normalization task in the biological field.

   Python 1

4. basenorm basenorm Public

   Implementation of a BERT model to normalize biological entities from the Bacteria Biotope 4 corpus.

   Python

5. reads-compression-optimization reads-compression-optimization Public

   Optimizing biological sequencing data organization for a better compression efficiency.

   Jupyter Notebook