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  1. GROMACS-COLAB GROMACS-COLAB Public

    Contains gromacs notebooks for MD simulations.

    Jupyter Notebook 5 1

  2. MODELLER-GUI MODELLER-GUI Public

    This is a Tkinter based MODELLER GUI program

    Python 1

  3. MSA-Gap-Analyzer MSA-Gap-Analyzer Public

    Python

  4. PCA-FEL PCA-FEL Public

    Jupyter Notebook 1

  5. Sequence_diversity_calculator Sequence_diversity_calculator Public

    Python

  6. PhIP-Seq-Pipeline-Installer PhIP-Seq-Pipeline-Installer Public

    These are the scripts developed for the Larman Lab which help new users install the PhIP-seq pipeline and its dependencies. This also installs Phipmake and ARscore dependencies.

    Shell