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fixed incorrect file suffixes Check Markdown links #153: Commit 56cb871 pushed by bnovak32
5m 26s DEV_Metagenomics_low_biomass_BN
DEV_Metagenomics_low_biomass_BN
5m 26s
Sync with workflow and latest EHR/RHR Check Markdown links #152: Commit 8a503ab pushed by bnovak32
4m 58s DEV_Metagenomics_low_biomass_BN
DEV_Metagenomics_low_biomass_BN
4m 58s
Added Humann output downstream analysis Check Markdown links #151: Commit 516d0d1 pushed by bnovak32
4m 59s DEV_Metagenomics_low_biomass_BN
DEV_Metagenomics_low_biomass_BN
4m 59s
Fix formatting Check Markdown links #150: Commit 4c087df pushed by jihanyehia
4m 33s DEV_Metagenomics_rmHR_NF_conversion
DEV_Metagenomics_rmHR_NF_conversion
4m 33s
Update documentation to use k2 instead of kraken2-build in building-d… Check Markdown links #149: Commit c492bf6 pushed by jihanyehia
31m 48s DEV_Metagenomics_rmHR_NF_conversion
DEV_Metagenomics_rmHR_NF_conversion
31m 48s
Updated documentation Check Markdown links #148: Commit 85ca41e pushed by bnovak32
5m 53s DEV_Metagenomics_rmHR_NF_conversion
DEV_Metagenomics_rmHR_NF_conversion
5m 53s
Update README links and add reference database documentation; modify … Check Markdown links #147: Commit 65461a1 pushed by jihanyehia
5m 59s DEV_Metagenomics_rmHR_NF_conversion
DEV_Metagenomics_rmHR_NF_conversion
5m 59s
Added top50 heatmaps Check Markdown links #146: Commit 5c9e3fa pushed by bnovak32
5m 2s DEV_Metagenomics_low_biomass_BN
DEV_Metagenomics_low_biomass_BN
5m 2s
Fix Metaphlan output specifications and missing assay suffixes Check Markdown links #145: Commit dcfd5bd pushed by bnovak32
6m 56s DEV_Metagenomics_low_biomass_BN
DEV_Metagenomics_low_biomass_BN
6m 56s
added missing step for generating Assembly-based processing overview Check Markdown links #144: Commit 6190d08 pushed by bnovak32
5m 38s DEV_Metagenomics_low_biomass_BN
DEV_Metagenomics_low_biomass_BN
5m 38s
Updated date/approvers Check Markdown links #143: Commit ebf2fa4 pushed by bnovak32
5m 44s DEV_Metagenomics_low_biomass_BN
DEV_Metagenomics_low_biomass_BN
5m 44s
Add missing steps and fix errors Check Markdown links #142: Commit eef9514 pushed by bnovak32
5m 39s DEV_Metagenomics_low_biomass_BN
DEV_Metagenomics_low_biomass_BN
5m 39s
updated humann info Check Markdown links #141: Commit f09a3dc pushed by bnovak32
4m 59s DEV_Metagenomics_low_biomass_BN
DEV_Metagenomics_low_biomass_BN
4m 59s
Updated output file definitions Check Markdown links #140: Commit b15a931 pushed by bnovak32
6m 29s DEV_Metagenomics_low_biomass_BN
DEV_Metagenomics_low_biomass_BN
6m 29s
Fix file suffixes Check Markdown links #139: Commit 41314bc pushed by bnovak32
7m 15s DEV_Metagenomics_low_biomass_BN
DEV_Metagenomics_low_biomass_BN
7m 15s
Add description to added params in nextflow_schema.json Check Markdown links #138: Commit 238d2f5 pushed by jihanyehia
5m 52s DEV_Metagenomics_rmHR_NF_conversion
DEV_Metagenomics_rmHR_NF_conversion
5m 52s
Update check_typos.yml Check typos #15: Commit 071537a pushed by bnovak32
26s master
master
26s
Update check_typos.yml Check Markdown links #137: Commit 071537a pushed by bnovak32
21s master
master
21s
Update markdown-link-check.yml Check typos #14: Commit e5c5065 pushed by bnovak32
23s master
master
23s
Update markdown-link-check.yml Check Markdown links #136: Commit e5c5065 pushed by bnovak32
21s master
master
21s
updates to match draft workflow. Check Markdown links #135: Commit 8bb7f21 pushed by bnovak32
6m 6s DEV_Metagenomics_low_biomass_BN
DEV_Metagenomics_low_biomass_BN
6m 6s
Remove legacy code from GENERATE_PROTOCOL process Check Markdown links #134: Commit b9aab8e pushed by jihanyehia
6m 13s DEV_Metagenomics_rmHR_NF_conversion
DEV_Metagenomics_rmHR_NF_conversion
6m 13s
Update workflow documentation to reflect changes Check Markdown links #133: Commit c97eab2 pushed by jihanyehia
4m 48s DEV_Metagenomics_rmHR_NF_conversion
DEV_Metagenomics_rmHR_NF_conversion
4m 48s
Implement protocol generation and update host reference handling in N… Check Markdown links #132: Commit 7d041bb pushed by jihanyehia
5m 0s DEV_Metagenomics_rmHR_NF_conversion
DEV_Metagenomics_rmHR_NF_conversion
5m 0s
Spelling and numbering fixes Check Markdown links #131: Commit 1e8d9e0 pushed by bnovak32
5m 40s DEV_Metagenomics_low_biomass_BN
DEV_Metagenomics_low_biomass_BN
5m 40s