Skip to content

Extending generate_scenario script #8

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
damirpolat wants to merge 1 commit into
base: master
Choose a base branch
from
Open

Extending generate_scenario script #8

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
79 changes: 71 additions & 8 deletions scripts/generate_scenario.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -14,7 +14,7 @@
import yaml
import copy

def generate_scenario(runtime_fn, features_fn, cutoff):
def generate_scenario(runtime_fn, features_fn, algo_features_fn, cutoff):
""" generates an ASlib scenario"""

description = {"scenario_id": "UNKNOWN",
Expand All @@ -30,9 +30,19 @@ def generate_scenario(runtime_fn, features_fn, cutoff):
"metainfo_algorithms": {},
"features_deterministic": "?", #TODO
"features_stochastic": "",
"number_of_feature_steps": 1,
"feature_steps":{"ALL":{"provides":"?"}}, #TODO
"default_steps": ["ALL"]}
"feature_steps":{"instance":{"provides":"?"}}} #TODO

if algo_features_fn:
description["algorithm_features_cutoff_time"] = "?"
description["algorithm_features_cutoff_memory"] = "?"
description["algorithm_features_deterministic"] = "?"
description["algorithm_features_stochastic"] = ""
description["algorithm_feature_steps"] = {"software":{"provides":"?"}}
description["number_of_feature_steps"] = 2
description["default_steps"] = ["instance", "software"]
else:
description["number_of_feature_steps"] = 1
description["default_steps"] = ["instance"]

#default algorithm info
algo_info = {"configuration": "",
Expand Down Expand Up @@ -76,7 +86,7 @@ def generate_scenario(runtime_fn, features_fn, cutoff):
with open(features_fn, "r") as fp:
feats = fp.readline().replace("\n", "").split(",")[1:]
description["features_deterministic"] = copy.deepcopy(feats)
description["feature_steps"]["ALL"]["provides"] = feats
description["feature_steps"]["instance"]["provides"] = feats

attributes = [ ["instance_id", "STRING"],
["repetition", "NUMERIC"]]
Expand Down Expand Up @@ -109,7 +119,7 @@ def generate_scenario(runtime_fn, features_fn, cutoff):
fs_attributes = [
["instance_id", "STRING"],
["repetition", "NUMERIC"],
["ALL", ["ok" , "timeout" , "memout" , "not_applicable" , "crash" , "other"]]
["instance", ["ok" , "timeout" , "memout" , "not_applicable" , "crash" , "other"]]
]

fs_data = {"attributes": fs_attributes,
Expand All @@ -119,17 +129,70 @@ def generate_scenario(runtime_fn, features_fn, cutoff):

with open("feature_runstatus.arff", "w") as fp:
arff.dump(fs_data, fp)



if algo_features_fn:
algorithms = []
status = {}
with open(algo_features_fn, "r") as fp:
feats = fp.readline().replace("\n", "").split(",")[1:]
description["algorithm_features_deterministic"] = copy.deepcopy(feats)
description["algorithm_feature_steps"]["software"]["provides"] = feats

attributes = [ ["algorithm", "STRING"],
["repetition", "NUMERIC"]]
data = []

for f in feats:
attributes.append([f, "NUMERIC"])

for line in fp:
line = line.replace("\n","").split(",")
algo = line[0]
feats = line[1:]
if sum(map(float, feats)) == -512*len(feats):
status[algo] = "timeout"
feats = ["?"]*len(feats)
else:
status[algo] = "ok"
d = [algo,1]
d.extend(feats)
data.append(d)

fv_data = {"attributes": attributes,
"data": data,
"relation" : "ALGORITHM_FEATURES"
}
with open("algorithm_feature_values.arff", "w") as fp:
arff.dump(fv_data, fp)

fs_data = [[algo, "1", stat] for algo,stat in status.iteritems()]
fs_attributes = [
["algorithm", "STRING"],
["repetition", "NUMERIC"],
["software", ["ok" , "timeout" , "memout" , "not_applicable" , "crash" , "other"]]
]

fs_data = {"attributes": fs_attributes,
"data": fs_data,
"relation" : "ALGORITHM_FEATURES_RUNSTATUS"
}

with open("algorithm_feature_runstatus.arff", "w") as fp:
arff.dump(fs_data, fp)


with open("description.txt", "w") as fp:
yaml.dump(description, fp, default_flow_style=False)

if __name__ == "__main__":
parser = argparse.ArgumentParser(formatter_class=argparse.ArgumentDefaultsHelpFormatter)
parser.add_argument("--runtime", required=True, help="csv file with runtimes (rows instances, cols algorithms)")
parser.add_argument("--features", required=True, help="csv file with instance features (rows instances, cols features)")
parser.add_argument("--algo_features", required=False, help="csv file with algorithm features (rows algorithms, cols features)")
parser.add_argument("--cutoff", required=True, type=float, help="runtime cutoff")

args_ = parser.parse_args()

generate_scenario(args_.runtime, args_.features, args_.cutoff)
generate_scenario(args_.runtime, args_.features, args_.algo_features, args_.cutoff)