ELASPIC REST API

Overview

Development

1. Build an elaspic-rest-api conda package.

   conda build .gitlab/conda

2. Create an elaspic-rest-api conda environment using the built package (this will automatically install all dependencies).

   conda create -n elaspic-rest-api --use-local elaspic-rest-api

3. (Optional) Install source package in development mode.

   conda activate elaspic-rest-api
   pip install -e .

4. Start the development server.

   conda activate elaspic-rest-api
   uvicorn elaspic_rest_api.app:app --host 0.0.0.0 --port 8000 --reload \
       --log-level=debug --log-config .gitlab/docker/logconfig.ini --env-file .env

Deployment

1. Build a Docker image.

   export CONDA_BLD_ARCHIVE_URL="https://gitlab.com/api/v4/projects/3259401/jobs/artifacts/master/download?job=build"
   
   docker build --build-arg CONDA_BLD_ARCHIVE_URL .gitlab/docker/

2. Run the built Docker image.

   docker run --tty --env-file .env --env HOST_USER_ID=9284 \
       --env=GUNICORN_CMD_ARGS="--bind 0.0.0.0:8080 --workers 1" \
       --volume /home/kimlab1/database_data/elaspic:/home/kimlab1/database_data/elaspic:rw \
       registry.gitlab.com/elaspic/elaspic-rest-api:latest