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1. MarioniLab/miloR MarioniLab/miloR Public

   R package implementation of Milo for testing for differential abundance in KNN graphs

   R 399 24

2. milopy milopy Public

   Python implementation of Milo for differential abundance testing on KNN graph

   Jupyter Notebook 74 9

3. Teichlab/Pan_fetal_immune Teichlab/Pan_fetal_immune Public

   Collection of scripts for analysis of pan fetal immune atlas

   Jupyter Notebook 28 7

4. MarioniLab/oor_benchmark MarioniLab/oor_benchmark Public

   A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data

   Python 13 2

5. MarioniLab/oor_design_reproducibility MarioniLab/oor_design_reproducibility Public

   Jupyter Notebook 16 1

6. scverse/pertpy scverse/pertpy Public

   Single-cell perturbation analysis

   Python 207 35