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fix: Add CONDA environment variable to action.yml #1

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fix: Add CONDA environment variable to action.yml #1

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182c53f
Add CONDA environment variable to action.yml
ezherman Dec 3, 2025
b61e003
Modify environment variable for Snakemake action
ezherman Dec 3, 2025
c658b7c
Add random conda installation suffix generation
ezherman Dec 3, 2025
b6602b1
Remove duplicate conda setup step from action.yml
ezherman Dec 3, 2025
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6 changes: 6 additions & 0 deletions action.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -73,6 +73,11 @@ runs:
- snakemake ==${{ inputs.snakemake-version }}
EOF

- name: Generate random conda installation suffix
shell: bash -el {0}
run: |
echo "CONDA_INSTALL_SUFFIX=${RANDOM}${RANDOM}" >> "$GITHUB_ENV"

- name: Setup conda
uses: conda-incubator/setup-miniconda@v3
with:
Expand All @@ -81,6 +86,7 @@ runs:
miniforge-version: latest
environment-file: .snakemake.environment.yaml
activate-environment: snakemake
installation-dir: ${{ runner.temp }}/snakemake_miniconda_${{ env.CONDA_INSTALL_SUFFIX }}

- name: Display snakemake version
shell: bash -el {0}
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