v0.5.1

What's Changed

• fix: resolve indexing issues in traceback and bump to 0.5.1 by @folded in #30

Full Changelog: v0.5.0...v0.5.1

v0.5.0

What's Changed

• Fix local-global alignment initialization to allow leading gaps by @folded in #26
• feat: implement top-k ungapped local alignment by @folded in #27
• Remove wheels that should not have been committed by @folded in #28
• Bump version to 0.5.0 by @folded in #29

Full Changelog: v0.4.0...v0.5.0

v0.4.0

What's Changed

• feat: Add detailed alignment statistics to traceback by @folded in #23
• feat: Support ambiguous characters in scoring matrix by @folded in #24
• Bump version to 0.4.0 by @folded in #25

Full Changelog: v0.3.0...v0.4.0

v0.3.0 Release

Bumps the project version to 0.3.0. This release includes rayon-based multithreading for improved performance.

v0.2.0

What's Changed

• refactor: Major API rename and release automation by @folded in #15

Full Changelog: v0.1.0...v0.2.0

v0.1.0

What's Changed

• fix precommits by @folded in #4
• rust: use direction enum for storing traceback directions by @folded in #1
• refactor/rust ndarray by @folded in #2
• chore/update gitignore by @folded in #3
• Refactor: Optimize array initialization in alignment functions by @folded in #5
• refactor(alignment): Unify traceback and fix glocal alignment by @folded in #6
• refactor: Consolidate alignment logic into data structures by @folded in #7
• chore/rename plus docs by @folded in #11
• feat: Add CIGAR string generation helper by @folded in #9
• refactor: Refactor alignment functions for explicit GIL release by @folded in #10
• feat: Integrate cibuildwheel for multi-platform wheel builds by @folded in #12
• fix: Resolve mypy and CI configuration for release by @folded in #13

New Contributors

• @folded made their first contribution in #4

Full Changelog: https://github.com/folded/seq-smith/commits/v0.1.0