✨ I'm a bioinformatician / computational geneticist based in Wellington, New Zealand. I am currently working at ESR (Institute of Environmental Science and Research) as a Senior Bioinformatician. I also dabble at photography and guitar, with a side of coffee, beer and single malts in the mix.
I have written and maintiain several documents about GPU compute for Nanopore sequencing that people find helpful, feel free to check them out:
- GPU musings (with an eye on genomics)
- GPU price / performance comparisons for Nanopore basecalling
- Nanopore Guppy GPU basecalling on Windows using WSL2
- Nvidia Jetson Xavier Community Gist
- Nvidia Jetson Nanopore Sequencing (GitHub Repository
You can find out more about me and connect in different ways below:
