Ak#36

Open

psoeffky wants to merge 217 commits intomasterfrom

Commits on Oct 9, 2014

Commits on Nov 11, 2014

Commits on Nov 16, 2014

Commits on Jan 3, 2015

Commits on Jan 6, 2015

fixed covariance in modem to out put the correct file.
kujaku11
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Commits on Jan 9, 2015

Commits on Jan 16, 2015

trying to make the plot responses faster
kujaku11
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Commits on Apr 7, 2015

Merge branch 'master' of https://github.com/geophysics/mtpy into jp.gui
kujaku11
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Commits on Nov 24, 2015

Commits on Nov 25, 2015

working on an occam 1d gui
kujaku11
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Commits on Dec 2, 2015

merged with master
kujaku11
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Commits on Mar 30, 2016

added static shift to core.mt and changed distortion so it removes it from a copy of Z
kujaku11
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Commits on Apr 1, 2016

Commits on Apr 2, 2016

adding masking points in gui/edi_editor
kujaku11
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Commits on Apr 4, 2016

Commits on Apr 5, 2016

added interpolation option, added plot setting. Need to add in editable .edi file
kujaku11
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Commits on Apr 6, 2016

Commits on Apr 7, 2016

merged
kujaku11
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Commits on Apr 8, 2016

adding to new_edi_object to read edi files, soon to write as well
kujaku11
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Commits on Apr 9, 2016

Merge branch 'jp.gui' of https://github.com/geophysics/mtpy into jp.gui
kujaku11
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Commits on Apr 11, 2016

added write edi to new_edi_object
kujaku11
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Commits on Apr 12, 2016

Commits on Apr 13, 2016

Commits on Apr 14, 2016

Commits on Apr 19, 2016

added a validation of strings that are separated by an = so to remove any ambiguity with how to split them up
kujaku11
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Commits on Apr 20, 2016

Commits on Apr 26, 2016

Commits on Apr 29, 2016

Commits on May 2, 2016

Commits on May 4, 2016

Commits on May 5, 2016

Commits on May 6, 2016

changed reading a modem model file to make grid_east, grid_north based on grid center
kujaku11
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Commits on May 9, 2016

changed line 814 to only plot the periods where tipper is non-zero.
kujaku11
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Commits on May 10, 2016

Commits on May 11, 2016

modified plot_settings in modem_plot_response to include changing the increase error value.
kujaku11
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Commits on May 12, 2016

Commits on May 17, 2016

fixing distortion removal to allow for zeros in the impedance and look at both 1d and 2d parts
kujaku11
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Commits on May 18, 2016

Commits on May 21, 2016

Commits on May 23, 2016

Commits on May 25, 2016

Commits on Jun 3, 2016

Commits on Jun 30, 2016

Commits on Aug 31, 2016

Commits on Sep 2, 2016

Commits on Oct 19, 2016

updates to modem_new

ak
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ak
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Commits on Oct 21, 2016

fixed bug in occam2d_rewrite - was not setting freq_max properly due to typo

ak
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give up on merging with beta, some serious bugs to sort out

ak
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Commits on Oct 23, 2016

updates to mt.interpolate to bring in line with beta

ak
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Commits on Oct 24, 2016

fixing occam1d modules

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fixing merge conflicts
Alison Kirkby
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fixing bugs in Occam1d

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updating core.edi from beta with bugs fixed

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Commits on Oct 25, 2016

fixing occam2d_rewrite to bring into line with beta, also updating errors to allow error floors to be set (instead of blanket error values)

ak
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fixing up references to edi_objects and changing to mt objects
Alison Kirkby
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fixed bug in removing out of quadrant phase values

ak
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fixing bugs in occam1d
Alison Kirkby
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occam1d fixing bug in plotting that arises from old version of matplotlib

ak
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ak
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small update to fix plotting

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bug fixing modem

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Commits on Oct 26, 2016

occam1d, added target_depth as an argument

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Commits on Oct 27, 2016

occam1d plot response-fix bug in plotting colours of data and response

ak
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occam1d plot response-further bug fixing in plotting colours of data and response

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Commits on Oct 28, 2016

fix bugs in occam2d_rewrite that emerged after merge with beta

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Commits on Nov 7, 2016

occam1d, added a check in the model setup that makes sure target depth, bottom layer and z1 layer are all consistent with each other (e.g. bottom layer not allowed to be less than target depth

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Commits on Nov 18, 2016

added example scripts for plotting

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added example scripts for plotting

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debugging example scripts

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debugging example scripts

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Commits on Dec 5, 2016

fixing calculation of center position in creation of a ModEM model. Added the ability to feed in a center position when reading a data file - currently errors occur when reading in data files that …

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Commits on Dec 6, 2016

remove excess print statements

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Commits on Dec 7, 2016

modem_new fixing grid_center position in model file

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Commits on Dec 9, 2016

modem_new fixes to grid z construction and relative locations of data. updated gocad export function to tidy up header part of sgrid

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modem sgrid function, added documentation and fixed clipping

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moved sgrid functionality to a separate class in utils/gocad.py - will be better for future if we want to read and write in other formats

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Commits on Dec 14, 2016

add functions to read gocad sgrid to ModEM models

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Commits on Dec 18, 2016

modem_new minor changes to fix setting of topography and covariance mask array

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Commits on Dec 19, 2016

modem_new added a class to work with residual files including calculating rms for individual stations

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modem_new bug fixing in calculation of rms values

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modem_new added function to write modelled, measured and residual phase tensor to a text file

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Commits on Dec 20, 2016

refactored write_pt_data_to_text into two functions

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modem_new, added functions to write phase tensor data to gmt input file, still working on it

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bug fixing

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modem_new, added to gmt function, now it outputs ellipse data for selected period as well as a template gmt script to plot the data

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Commits on Dec 21, 2016

added function to write rms values from modem to file

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added to documentation and also generalised to be able to plot residuals and response as well as data. added function to write rms data to file

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ModEM => gmt bug fixing and adding some more options

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Commits on Jan 18, 2017

Fix minor bug in setting up of occam1d inversions
Alison Kirkby
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Commits on Jan 20, 2017

occam2d_rewrite bug fixing, changes to setting of phase and errors in data file, also updated building of regularization to ensure it is consistent with mesh

ak
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Commits on Jan 22, 2017

fixing errors in setting of resistivity errors

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Commits on Jan 23, 2017

occam2d, fixed bug in reading of mesh and model, also, added a check in creating data file that stops res_error being > 100% of res value

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Commits on Jan 24, 2017

occam2d, updating res errors and added functionality to mask a new data file based on an old (masked) data file)

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Merge branch 'ak' of github.com:geophysics/mtpy into ak

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Commits on Jan 25, 2017

modem_new, added simple function to save res model data as x, y, res

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modem_new, minor updates to modem => xyz function

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Commits on Jan 27, 2017

modem_new, shifted project function out and into utils/latlongutmconversion module

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Commits on Feb 3, 2017

updates to modem_new (projections) and utils.utmlatlongconversions. Also adding modules to create gmt maps (not finished yet!)

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Commits on Feb 6, 2017

gmtmap updates, not working yet....

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Commits on Feb 10, 2017

gmtmaps, further work plus modem_new - fixes to z grid creation and some changes to projections to not rely on epsg_dict

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Commits on Feb 15, 2017

core.mt.interpolate - changed to interpolating log freq rather than linear frequencies, to prevent spikes in interpolated result

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Commits on Sep 8, 2017

modem_new updated calculation of z grid

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Commits on Sep 13, 2017

update mt.interpolate function to match beta. Fixes problem with zero values in the input data

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modem_new, fixed the calculation of number of stations and number of periods to put into modem data file

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Commits on Sep 15, 2017

modem_new further fixes to get models running

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Commits on Sep 17, 2017

modem_new class Data, updated definition of attribute period_buffer so it makes more sense

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Commits on Sep 18, 2017

added a nc_extra parameter, number of cells outside core station area but inside padding

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