The Gevaert lab focuses on biomedical data fusion of complex diseases with a particular focus on oncology and cardiovascular diases. We develop novel machine learning approaches that digest multi-omics, multi-modal or multi-scale data. Previously we pioneered data fusion work using Bayesian and kernel methods studying breast and ovarian cancer. Subsequent work concerned the development of methods for multi-omics data fusion. This resulted in the development of MethylMix, to identify differentially methylated genes, and AMARETTO, a computational method to integrate DNA methylation, copy number and gene expression data to identify cancer modules. Additionally, my lab focuses on linking molecular data with cellular and tissue-level phenotypes. This led to key contributions in the field of imaging genomics/radiogenomics involving work in lung cancer and brain tumors. Our work in imaging genomics is focused on developing a framework for non-invasive personalized medicine. In summary, my lab has an interdisciplinary focus on developing novel algorithms for multi-scale biomedical data fusion.
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- benchmarking-path-models Public
gevaertlab/benchmarking-path-models’s past year of commit activity - RNA-GAN Public
Synthetic whole-slide imaging tile generation with gene expression profiles infused deep generative models - Cell Reports Methods
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SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention
gevaertlab/sequoia-pub’s past year of commit activity - NucSegAI Public
gevaertlab/NucSegAI’s past year of commit activity - EpiMix Public
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gevaertlab/Variational-Auto-Encoder’s past year of commit activity - GBM360 Public
Spatial cellular architecture predicts prognosis in glioblastoma - Nature Communications
gevaertlab/GBM360’s past year of commit activity - MultiModalBrainSurvival Public
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