Release v0.5.0
Main changes since last release:
- BigQuery to VCF (alpha release): Generate VCF files from any BigQuery table generated using Variant Transforms. This can be useful when working with tools that only operate on VCF files. The available options enable generating small files (e.g. by specifying genomic regions of interest or a subset of samples) to very large files (e.g. exporting an entire BigQuery table as a VCF file).
- Annotation type inference: By default, all annotation fields are loaded as strings. Simply add
--infer_annotation_typesand the pipeline will automatically infer field types from the annotation content.