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A self-contained widget for phylogenetic and taxonomic tree visualization with categorical and continuous variables associated with nodes and tips

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grunwaldlab/heat-tree

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heat-tree: A JavaScript package for phylogenetic and taxonomic tree visualization

Under development.

Features:

  • Reads tree data from Newick files
  • Reads data associated with tips/nodes in tree as a TSV file.
  • Zooming and panning
  • Nodes can be collapsed and the layout of the rest of tree responds
  • Nodes/tips have sizes and colors that correspond to continuous variables
  • Nodes/tips have shapes colors that correspond to categorical variables
  • Branches have thicknesses and colors that correspond to continuous variables
  • Which variable use to set node/tip/branch colors/sizes can be changed by embedded controls

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A self-contained widget for phylogenetic and taxonomic tree visualization with categorical and continuous variables associated with nodes and tips

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