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hdescobarh/README.md

Hi!, I am Hans Escobar 👨‍🔬

I apply computational methods to tackle complex biological problems. I'm a biologist passionate about bioinformatics and computational modeling of biological systems, with a strong foundation in scientific programming and software development.

My Personal Projects

  • parkinson-gene-panel: A semiautomatic workflow to merge, curate and generate ready-to-use files for Whole Genome Sequencing based Parkinson's Disease virtual panel.
  • pairwasm_alignment: pairwise sequence alignment developed in Rust 🦀 and WebAssembly.

🤝 Let's Connect!

Thanks for stopping by! 🙌 Feel free to explore my work and reach out if you're interested in collaborating!

LinkedIn

Top used languages card

Interests:

Clinical Bioinformatics 🧪 | Theoretical Biology 👾 | Philosophy of Science 🤔

👨‍💻 Tech Stack:

  • Programming: Python, Rust, Bash. I have also worked with R and MATLAB.
  • Bioinformatics: NGS data analysis, metabolic reconstructions, variant calling.
  • Workflow Management: Nextflow, Git, SLURM.

Pinned Loading

  1. parkinson-gene-panel parkinson-gene-panel Public

    Virtual gene panel integration for Parkinson's Disease. This workflow collects, filters, and enriches gene panels with genomic features from NCBI, producing ready-to-use BED files.

    Jupyter Notebook 1

  2. pairwasm_alignment pairwasm_alignment Public

    This is an experiment implementing a WebAssembly pairwise sequence alignment module in Rust 🦀.

    Rust 2