Align TROP with paper methodology (Equation 5, D matrix semantics)#110

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igerber merged 13 commits intomainfrom

fix/trop-methodology-alignment

Jan 25, 2026

Commits on Jan 25, 2026

Align TROP with paper methodology (Equation 5, D matrix semantics)

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Address PR #110 feedback: NaN propagation, LOOCV warnings, docs

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Address PR #110 feedback round 2: Rust warning consistency, test determinism

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Fix Rust backend test for new loocv_grid_search return signature

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Return infinity on ANY LOOCV failure per Equation 5

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Address PR #110 feedback round 4: LOOCV cycling, D matrix validation

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Address PR #110 feedback round 5: LOOCV infinity handling, λ_nn semantics

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Address PR #110 feedback round 6: final estimation infinity handling

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Address PR #110 feedback round 7: three infinity/edge case fixes

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Address PR #110 feedback round 8: three LOOCV/validation fixes

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Fix Rust backend test for loocv_grid_search 7-value return

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Address PR #110 feedback round 9: fix test fixture mismatch

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Address PR #110 feedback round 10: absorbing-state gap detection and n_post_periods fix

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